Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1002/1878-0261.12389

https://doi.org/10.1002/1878-0261.12389

Using microarray‐based subtyping methods for breast cancer in the era of high‐throughput RNA sequencing

Cited by: 6
Author(s): Christina Bligaard Pedersen, Finn C. Nielsen, Maria Rossing, Lars Rønn Olsen
Published: almost 6 years ago

Software Mentions 7

bioconductor: frma
Frozen RMA and Barcode
Papers that mentioned: 26
bioconductor: preprocessCore
A collection of pre-processing functions
Papers that mentioned: 146
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
cran: jetset
One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays
Papers that mentioned: 8
pypi: jetset
A framework for self-consistent modeling and fitting of astrophysical relativistic jets SEDs
Papers that mentioned: 8
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017