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bioconductor: sesame
SEnsible Step-wise Analysis of DNA MEthylation BeadChipsPapers that mentioned: 2
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pypi: quinoa
This is a base class for making Jabber bots that are aware of MUC/groupchat.Papers that mentioned: 2
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pypi: igv_plotter
python interface to IGV that simplifies creating screenshots of BAMs, VCFs, BEDs, etc for one-off spot checking or automated / scripted image collectionPapers that mentioned: 2
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cran: augmentedRCBD
Analysis of Augmented Randomised Complete Block DesignsPapers that mentioned: 2
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pypi: dragon
A powerful toolkit targeting Apple development, research, and packaging.Papers that mentioned: 2
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pypi: Pweave
Scientific reports with embedded python computations with reST, LaTeX or markdownPapers that mentioned: 2
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bioconductor: clustifyr
Classifier for Single-cell RNA-seq Using Cell ClustersPapers that mentioned: 2
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pypi: hic2cool
Converter between hic files (from juicer) and single-resolution or multi-resolution cool files (for cooler). Both hic and cool files describe Hi-C contact matrices. Intended to be lightweight, this can be used as an imported package or a stand-alone Python tool for command line conversion.Papers that mentioned: 2
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pypi: archetypes
A scikit-learn compatible Python package for archetypal analysisPapers that mentioned: 2
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pypi: phi
Phi is a library for fluent functional programming in Python which includes a DSL + facilities to create libraries that integrate with it.Papers that mentioned: 2
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pypi: ExGUtils
Tools for statistical analyses using the ex-gaussian function (C sources compiled).Papers that mentioned: 2
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pypi: pgui
Papers that mentioned: 2
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cran: rappdirs
Application Directories: Determine Where to Save Data, Caches, and LogsPapers that mentioned: 2
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pypi: pandora
Pandora is a stereo matching framework that helps emulate state of the art algorithmsPapers that mentioned: 2
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pypi: Preferences
It a simple class that creates a list of dictionarries to store preferences as key value pairs. You can use the class directly or load the preferences from files. The main reason I wrote it was to create an easy way of storing more than one preference with the same name and load them form files in a manner that allows for easy appending or replacing of parmeters that could have been loaded from a default prameter file. There are also several methods to make managing the preferences easier.Papers that mentioned: 2
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bioconductor: GeneExpressionSignature
Gene Expression Signature based Similarity MetricPapers that mentioned: 2
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cran: PWD
Time Series Regression Using the Power Weighted Densities (PWD) ApproachPapers that mentioned: 2
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pypi: DigitalCellSorter
Toolkit for analysis and identification of cell types from heterogeneous single cell RNA-seq dataPapers that mentioned: 2
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cran: speedglm
Fitting Linear and Generalized Linear Models to Large Data SetsPapers that mentioned: 2
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pypi: prequel
An interpreted relational query language that compiles to SQLPapers that mentioned: 2
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pypi: multicore
Simpler Python multiprocess coding. Persistent workers, memory maps for minimum overhead.Papers that mentioned: 2
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pypi: NanoCap
Application and libraries for the generation of carbon fullerenes, nanotubes and capped nanotubesPapers that mentioned: 2
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pypi: sked
CLI utility to create AWS Scheduled Actions using instance tags or autoscaling id via a config filePapers that mentioned: 2
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pypi: seqfile
Find the next file in a sequence of files in a thread-safe way.Papers that mentioned: 2
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