bioconductor: OLINgui
Graphical user interface for OLIN
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cran: opencage
Geocode with the OpenCage API
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cran: LCAvarsel
Variable Selection for Latent Class Analysis
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pypi: seagull
2D scene graph based on SVG with OpenGL backend
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cran: LGEWIS
Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Studies
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pypi: blimp
Blimp library for Python
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bioconductor: pepXMLTab
Parsing pepXML files and filter based on peptide FDR.
Papers that mentioned: 2
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pypi: block
Improved block matrix creation for numpy and PyTorch.
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cran: RM.weights
Weighted Rasch Modeling and Extensions using Conditional Maximum Likelihood
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pypi: bmm
Bayesian Map-matching
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bioconductor: scBFA
A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq
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bioconductor: SCBN
A statistical normalization method and differential expression analysis for RNA-seq data between different species
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bioconductor: scp
Mass Spectrometry-Based Single-Cell Proteomics Data Analysis
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bioconductor: SemDist
Information Accretion-based Function Predictor Evaluation
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bioconductor: seqsetvis
Set Based Visualizations for Next-Gen Sequencing Data
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pypi: RESTEasy
REST API calls made easier
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pypi: BondGraphTools
Bond Graph Modelling Toolkit
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pypi: swc
Solar performance calculator
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pypi: ed
the standard text editor
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cran: logisticPCA
Binary Dimensionality Reduction
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pypi: ParallelDots
Python Wrapper for ParallelDots APIs
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cran: lokern
Kernel Regression Smoothing with Local or Global Plug-in Bandwidth
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cran: MIIVsem
Model Implied Instrumental Variable (MIIV) Estimation of Structural Equation Models
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pypi: mercurial
Fast scalable distributed SCM (revision control, version control) system
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pypi: output
print list
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pypi: parallel-fastq-dump
parallel fastq-dump wrapper
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bioconductor: Ularcirc
Shiny app for canonical and back splicing analysis (i.e. circular and mRNA analysis)
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bioconductor: VegaMC
VegaMC: A Package Implementing a Variational Piecewise Smooth Model for Identification of Driver Chromosomal Imbalances in Cancer
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pypi: funcgen
A small module for generating sets of function signatures and corresponding function objects.
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cran: mallet
An R Wrapper for the Java Mallet Topic Modeling Toolkit
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pypi: mesh
A declarative RESTful API framework.
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cran: ucminf
General-Purpose Unconstrained Non-Linear Optimization
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cran: ouch
Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
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cran: mDAG
Inferring Causal Network from Mixed Observational Data Using a Directed Acyclic Graph
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cran: mds
Medical Devices Surveillance
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pypi: furniture
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cran: ox
Shorthand if-Else
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cran: memgene
Spatial Pattern Detection in Genetic Distance Data Using Moran's Eigenvector Maps
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pypi: swig
SWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.
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cran: mexhaz
Mixed Effect Excess Hazard Models
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pypi: Aap
A portable build tool (make replacement) with internet support
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cran: Umpire
Simulating Realistic Gene Expression and Clinical Data
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pypi: Lapse
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pypi: acq4
Neurophysiology acquisition and analysis platform
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pypi: other
The Zen of Zope, by Alex Clark
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pypi: actin
Activity Indices Calculator
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pypi: ACTIONet
ACTIONet single-cell analysis framework
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cran: pammtools
Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis
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pypi: active
Simple Microservice Application Runtime Toolkit
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pypi: bpmodels
BrainPy-Models: An example package accompany with BrainPy.
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pypi: brainrender
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pypi: ADwin
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pypi: agalma
An automated phylogenomics pipeline.
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Methods for the Indirect Estimation of Bilateral Migration
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pypi: riboSeed
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pypi: gaga
A genetic algorithm
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Python API and command line interface for the GA4GH htsget API.
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pypi: Brownie
Common utilities and datastructures for Python applications.
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pypi: rigid
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Two Sample Mendelian Randomization using Robust Adjusted Profile Score
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pypi: ring
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pypi: Metage2Metabo
Automatic reconstruction of draft metabolic networks with Pathway Tools and graph-based metabolic analysis
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cran: pbdMPI
R Interface to MPI for HPC Clusters (Programming with Big Data Project)
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pypi: galgo
A collection of algorithms and tools for genome analysis
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cran: properties
Parse 'Java' Properties Files for 'R Service Bus' Applications
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cran: prophet
Automatic Forecasting Procedure
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cran: recom
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pypi: each
A tool for running programs on many inputs
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cran: psychmeta
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cran: PTAk
Principal Tensor Analysis on k Modes
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cran: PubBias
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cran: psychotree
Recursive Partitioning Based on Psychometric Models
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pypi: EPost
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cran: popsom
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pypi: esm
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pypi: ev
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pypi: conflex
Flexible and extensible configuration reader for python.
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pypi: Const
a static site generator
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pypi: Contacts
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pypi: p0f
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cran: prais
Prais-Winsten Estimator for AR(1) Serial Correlation
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pypi: crawler
Web Scraping Framework based on py3 asyncio
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pypi: crayon
Utility for styling terminal text output
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cran: pragma
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pypi: Cytoplasm
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cran: mutSignatures
Decipher Mutational Signatures from Somatic Mutational Catalogs
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pypi: ctf
Papers that mentioned: 2
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pypi: dateutil
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pypi: db2
Simple mysql ORM with type checking
Papers that mentioned: 2
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pypi: dcp
Command line utility for coping of files and folders via python bypassing system call.
Papers that mentioned: 2
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pypi: DeerLab
Comprehensive package for data analysis of dipolar EPR spectroscopy
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cran: peptider
Evaluation of Diversity in Nucleotide Libraries
Papers that mentioned: 2
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pypi: dash
A Python framework for building reactive web-apps. Developed by Plotly.
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pypi: Deepfake
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pypi: devo
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pypi: dFlow
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pypi: Atest
Tool of Asdil
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pypi: distribution
UNKNOWN
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pypi: dlg
python wrapper for dialog/Xdialog/gdialog programs
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