Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
bioconductor: MethTargetedNGS
Perform Methylation Analysis on Next Generation Sequencing DataPapers that mentioned: 1
cran: iva
Instrumental Variable Analysis in Case-Control Association StudiesPapers that mentioned: 1
cran: NORMT3
Evaluates Complex Erf, Erfc, Faddeeva, and Density of Sum of Gaussian and Student's tPapers that mentioned: 1
cran: IsoCorr
Correcting Drift and Carry-over in Continuous Isotopic MeasurementsPapers that mentioned: 1
bioconductor: MesKit
A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic alterationsPapers that mentioned: 1
pypi: colorizer
Console colorizer, which acts like grep but paint each match in it's own color.Papers that mentioned: 1
bioconductor: MeSHDbi
DBI to construct MeSH-related package from sqlite filePapers that mentioned: 1
bioconductor: MEIGOR
MEIGO - MEtaheuristics for bIoinformatics Global OptimizationPapers that mentioned: 1
cran: nprobust
Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density EstimationPapers that mentioned: 1
cran: nproc
Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) CurvesPapers that mentioned: 1
bioconductor: geneAttribution
Identification of candidate genes associated with genetic variationPapers that mentioned: 1
cran: irrNA
Coefficients of Interrater Reliability – Generalized for Randomly Incomplete DatasetsPapers that mentioned: 1
cran: irrICC
Intraclass Correlations for Quantifying Inter-Rater ReliabilityPapers that mentioned: 1
bioconductor: MCbiclust
Massive correlating biclusters for gene expression data and associated methodsPapers that mentioned: 1
bioconductor: HiCBricks
Framework for Storing and Accessing Hi-C Data Through HDF FilesPapers that mentioned: 1
pypi: colorspacious
A powerful, accurate, and easy-to-use Python library for doing colorspace conversionsPapers that mentioned: 1
cran: IPDfromKM
Map Digitized Survival Curves Back to Individual Patient DataPapers that mentioned: 1
pypi: colour
converts and manipulates various color representation (HSL, RVB, web, X11, ...)Papers that mentioned: 1
cran: GLMMRR
Generalized Linear Mixed Model (GLMM) for Binary Randomized Response DataPapers that mentioned: 1
cran: intRvals
Analysis of Time-Ordered Event Data with Missed ObservationsPapers that mentioned: 1
cran: interpretR
Binary Classifier and Regression Model Interpretation FunctionsPapers that mentioned: 1
bioconductor: graper
Adaptive penalization in high-dimensional regression and classification with external covariates using variational BayesPapers that mentioned: 1
cran: IntegratedMRF
Integrated Prediction using Uni-Variate and Multivariate Random ForestsPapers that mentioned: 1
bioconductor: maPredictDSC
Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature ChallengePapers that mentioned: 1
bioconductor: mAPKL
A Hybrid Feature Selection method for gene expression dataPapers that mentioned: 1
bioconductor: LymphoSeq
Analyze high-throughput sequencing of T and B cell receptorsPapers that mentioned: 1
bioconductor: GmicR
Combines WGCNA and xCell readouts with bayesian network learrning to generate a Gene-Module Immune-Cell network (GMIC)Papers that mentioned: 1
cran: GOxploreR
Structural Exploration of the Gene Ontology (GO) Knowledge BasePapers that mentioned: 1
bioconductor: girafe
Genome Intervals and Read Alignments for Functional ExplorationPapers that mentioned: 1
cran: opdisDownsampling
Optimal Distribution Preserving Down-Sampling of Bio-Medical DataPapers that mentioned: 1
bioconductor: LPEadj
A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size.Papers that mentioned: 1
pypi: Bluebook
Pylot is a Flask extension that adds structure and map your views and templates together for rapid application developmentPapers that mentioned: 1
bioconductor: LinkHD
LinkHD: a versatile framework to explore and integrate heterogeneous dataPapers that mentioned: 1
cran: igraphdata
A Collection of Network Data Sets for the 'igraph' PackagePapers that mentioned: 1
pypi: Boutique
The command line tool for boutiqueforge.com. It contains a web server embedded that can emulate the BoutiqueForge environment. This allows you to develop and test on your local machine before pushing any changes to online. More information at https://boutiqueforge.com/docs/article/getting_startedPapers that mentioned: 1