Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
bioconductor: scTHI
Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing dataPapers that mentioned: 1
bioconductor: scruff
Single Cell RNA-Seq UMI Filtering Facilitator (scruff)Papers that mentioned: 1
bioconductor: scDataviz
scDataviz: single cell dataviz and downstream analysesPapers that mentioned: 1
pypi: audition
A small web framework that validates requests and provides an API.Papers that mentioned: 1
pypi: auk
Micro-package for compiling s-expressions into Python's predicate functionsPapers that mentioned: 1
bioconductor: similaRpeak
Metrics to estimate a level of similarity between two ChIP-Seq profilesPapers that mentioned: 1
bioconductor: sevenC
Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifsPapers that mentioned: 1
bioconductor: signatureSearch
Environment for Gene Expression Searching Combined with Functional Enrichment AnalysisPapers that mentioned: 1
bioconductor: sRACIPE
Systems biology tool to simulate gene regulatory circuitsPapers that mentioned: 1
cran: lmem.qtler
Papers that mentioned: 1cran: loop
loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecologyPapers that mentioned: 1
pypi: autocbei
"autoCBEI.py" can calculate the potential CBEI loci of the target CDSs and perform statistics and plots.Papers that mentioned: 1
pypi: autoconfig
Simple environment, logging, and sys.path setup from a config filePapers that mentioned: 1
cran: LocFDRPois
Functions for Performing Local FDR Estimation when Null and Alternative are PoissonPapers that mentioned: 1
cran: MAAPER
Analysis of Alternative Polyadenylation Using 3' End-Linked ReadsPapers that mentioned: 1
pypi: autofeat
Automatic Feature Engineering and Selection Linear Prediction ModelPapers that mentioned: 1
pypi: autolab
Python package for scientific experiments interfacing and automationPapers that mentioned: 1
bioconductor: traseR
GWAS trait-associated SNP enrichment analyses in genomic intervalsPapers that mentioned: 1
bioconductor: VariantFiltering
Filtering of coding and non-coding genetic variantsPapers that mentioned: 1
pypi: auDeep
auDeep is a Python toolkit for unsupervised feature learning with deep neural networks (DNNs)Papers that mentioned: 1
cran: matlib
Matrix Functions for Teaching and Learning Linear Algebra and Multivariate StatisticsPapers that mentioned: 1
cran: MAPLES
Papers that mentioned: 1cran: MC2toPath
Translates information from netcdf files with MC2 output into inter-PVT transitionsPapers that mentioned: 1
pypi: AutoSmart
Papers that mentioned: 1pypi: autotagger
Tag .mp3 and .m4a audio files from iTunes data automatically.Papers that mentioned: 1
pypi: axis
A Python library for communicating with devices from Axis CommunicationsPapers that mentioned: 1
pypi: ballet
Core functionality for lightweight, collaborative data science projectsPapers that mentioned: 1
pypi: backmap
Shows protein backbone structures in compact graphical form using Ramachandran numbersPapers that mentioned: 1
cran: meaRtools
Papers that mentioned: 1cran: mecor
Measurement Error Correction in Linear Models with a Continuous OutcomePapers that mentioned: 1
cran: met
Papers that mentioned: 1cran: metaBMA
Bayesian Model Averaging for Random and Fixed Effects Meta-AnalysisPapers that mentioned: 1
cran: MetaDBparse
Annotate Mass over Charge Values with Databases and Formula PredictionPapers that mentioned: 1