Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi: doppel
A friendly file copier/installer
Papers that mentioned: 1
pypi: doodle
A library to segment objects in an image in a semi-automated fashion.
Papers that mentioned: 1
pypi: SCNIC
A tool for finding and summarizing modules of highly correlated observations in compositional data
Papers that mentioned: 1
pypi: dpkt
fast, simple packet creation / parsing, with definitions for the basic TCP/IP protocols
Papers that mentioned: 1
pypi: scobra
Supplementary package for COBRApy
Papers that mentioned: 1
pypi: scorecard
PMML Scorecard generator
Papers that mentioned: 1
pypi: donut
Makes symlinks to dotfiles.
Papers that mentioned: 1
pypi: scorecardpy
Credit Risk Scorecard
Papers that mentioned: 1
pypi: scratch
Interface Python with MIT Scratch 1.3+ (not 2.x)
Papers that mentioned: 1
pypi: dongle
Papers that mentioned: 1
pypi: scribe
Log like it's going out of style
Papers that mentioned: 1
pypi: screed
a Python library for loading FASTA and FASTQ sequences
Papers that mentioned: 1
pypi: don
Dot Object Notation (DON) parser.
Papers that mentioned: 1
pypi: Domo
Domo is a web crawler & archiver
Papers that mentioned: 1
pypi: ecd
the english translate tool
Papers that mentioned: 1
pypi: sdt_metrics
Signal Detection Theory (SDT) metrics for Python
Papers that mentioned: 1
pypi: sealed
An example
Papers that mentioned: 1
pypi: EasyStats
Gaussian and Binomial distributions
Papers that mentioned: 1
pypi: dnachisel
Optimize DNA sequences under constraints.
Papers that mentioned: 1
pypi: dms2dfe
Pipeline to analyse Deep Mutational Scanning (DMS) experiments in terms of Distribution of Fitness Effects (DFE)
Papers that mentioned: 1
pypi: SearchBar
Have fun searching in IDLE!
Papers that mentioned: 1
pypi: dmp
Repackaging of Google's Diff Match and Patch libraries. Offers robust algorithms to perform the operations required for synchronizing plain text.
Papers that mentioned: 1
pypi: seeker
Predict bacterial or phage sequence
Papers that mentioned: 1
pypi: discuss

Papers that mentioned: 1
pypi: seekpath
A module to obtain and visualize k-vector coefficients and obtain band paths in the Brillouin zone of crystal structures
Papers that mentioned: 1
pypi: secimtools
'Metabolomics tools from the SECIM project',
Papers that mentioned: 1
pypi: SeCo
Python data serialization and compression made easy.
Papers that mentioned: 1
pypi: sect
Geometries partitioning.
Papers that mentioned: 1
pypi: SeeMee
Application which detects which camera you're looking at
Papers that mentioned: 1
pypi: wishbone
Build composable event pipeline servers with minimal effort.
Papers that mentioned: 1
pypi: selinux
shim selinux module
Papers that mentioned: 1
pypi: security
The security toolkit for the Python comminity.
Papers that mentioned: 1
pypi: seer
Python client for cshenton/seer
Papers that mentioned: 1
pypi: discsim
Efficient coalescent simulation in continuous space
Papers that mentioned: 1
pypi: seesaw
ArchiveTeam seesaw kit
Papers that mentioned: 1
pypi: django-mongodb-engine
MongoDB backend for Django-nonrel
Papers that mentioned: 1
pypi: seglearn
A template for scikit-learn compatible packages.
Papers that mentioned: 1
pypi: DigiPathAI
Deep Learning toolbox for WSI (digital histopatology) analysis
Papers that mentioned: 1
pypi: digi
Digi driver library
Papers that mentioned: 1
pypi: dirichlet
Calculates Dirichlet test and plots 2-simplex Dirichlets
Papers that mentioned: 1
pypi: digger

Papers that mentioned: 1
pypi: director
Command line plugin library
Papers that mentioned: 1
pypi: ecalc
a simple Python-based calculator for network engineers/researchers
Papers that mentioned: 1
pypi: SendEmails

Papers that mentioned: 1
pypi: sepia
Static file generator.
Papers that mentioned: 1
pypi: discrete
Pure Python implementation of discrete random variables
Papers that mentioned: 1
pypi: DiPAS
DiPAS is a framework for differentiable simulations of particle accelerators.
Papers that mentioned: 1
pypi: Selecting
Object-based abstraction over the system call select()
Papers that mentioned: 1
pypi: wordpress
Wordpress API client
Papers that mentioned: 1
pypi: DigixDAO

Papers that mentioned: 1
pypi: django-helpdesk
Django-powered ticket tracker for your helpdesk
Papers that mentioned: 1
pypi: ecosys
Papers that mentioned: 1
cran: pulseTD
Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data
Papers that mentioned: 1
pypi: diffbot
Python client for the Diffbot API.
Papers that mentioned: 1
pypi: dicompyler-core
A library of core radiation therapy modules for DICOM / DICOM RT used by dicompyler
Papers that mentioned: 1
pypi: sequitur
Autoencoders for sequential data
Papers that mentioned: 1
pypi: sharp
Wrapper for the libsharp spherical harmonics transofrm library
Papers that mentioned: 1
pypi: sha256sum
Compute SHA256 message digest from a file
Papers that mentioned: 1
pypi: dicompyler
Extensible radiation therapy research platform and viewer for DICOM and DICOM RT.
Papers that mentioned: 1
pypi: dicom-parser
DICOM files parser meant to facilitate data access.
Papers that mentioned: 1
pypi: shade
Simple client library for interacting with OpenStack clouds
Papers that mentioned: 1
pypi: serac
Incremental permanent data archiver with encryption
Papers that mentioned: 1
pypi: wizards
Wizards of Industry Common Library
Papers that mentioned: 1
pypi: dgenome

Papers that mentioned: 1
pypi: DEWAKSS
Denoising Expression data with a Weighted Affinity Kernel and Self-Supervision.
Papers that mentioned: 1
pypi: dgenies
Dotplot large Genomes in an Interactive, Efficient and Simple way
Papers that mentioned: 1
pypi: seven
Python 2.5 compatibility wrapper for Python 2.7 code.
Papers that mentioned: 1
pypi: SexMachine
Get the gender from first name.
Papers that mentioned: 1
pypi: shmlast
An improved implementation of Conditional Reciprocal Best Hits with LAST and Python.
Papers that mentioned: 1
pypi: sfaira
sfaira is a model and a data repository for single-cell data in a single python package.
Papers that mentioned: 1
pypi: sfe
Python and finite Elements
Papers that mentioned: 1
pypi: dice
A library for parsing and evaluating dice notation
Papers that mentioned: 1
pypi: derivatives
Papers that mentioned: 1
pypi: wo
Workflow Orchestration tool
Papers that mentioned: 1
pypi: devkit
A tool to efficiently manage development environment
Papers that mentioned: 1
pypi: device
it just a test!
Papers that mentioned: 1
pypi: workspace
Workspace Overmind
Papers that mentioned: 1
pypi: detecting
detecting
Papers that mentioned: 1
pypi: dendrite
Social connectivitiy as a library
Papers that mentioned: 1
pypi: descriptors
A collection of descriptors for validating input data.
Papers that mentioned: 1
pypi: share
shared files in lan
Papers that mentioned: 1
pypi: denoise

Papers that mentioned: 1
pypi: slalom

Papers that mentioned: 1
pypi: developer
The root package for Neurospaces components for GENESIS 3
Papers that mentioned: 1
pypi: SIDEKIT
Speaker, Language Recognition and Diarization package.
Papers that mentioned: 1
pypi: SIDR
Sequence Idenification using Decision tRees; a tool to classify DNA reads using machine learning models.
Papers that mentioned: 1
pypi: derivative
Numerical differentiation in python.
Papers that mentioned: 1
pypi: sif
python handle for reading sif images
Papers that mentioned: 1
pypi: dh
Personal Python package of Daniel Haase
Papers that mentioned: 1
pypi: delphi
A framework for assembling probabilistic models from text.
Papers that mentioned: 1
pypi: siggen
Experimental extraction of Socorro signature generation
Papers that mentioned: 1
pypi: sight
A library for Vision Processing
Papers that mentioned: 1
pypi: sign
inherit **kwargs from another fucntion in the signature.
Papers that mentioned: 1
pypi: signac
Manage large and heterogeneous data spaces on the file system.
Papers that mentioned: 1
pypi: simmer
Stellar Image Maturation via Efficient Reduction
Papers that mentioned: 1
pypi: simc
A dynamically typed high-level front end for C
Papers that mentioned: 1
pypi: SimConnect
Adds a pythonic wrapper for SimConnect SDK.
Papers that mentioned: 1
pypi: demography
Demographic mapping based on UK ONS & census data.
Papers that mentioned: 1
pypi: SimpactPurple
Agent-based HIV modeling tool.
Papers that mentioned: 1
pypi: dEploid
dEploid CPP module
Papers that mentioned: 1