Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

cran: fExtremes
Rmetrics - Modelling Extreme Events in Finance
Papers that mentioned: 1
bioconductor: miRcomp
Tools to assess and compare miRNA expression estimatation methods
Papers that mentioned: 1
cran: ms.sev
Package for Calculation of ARMSS, Local MSSS and Global MSSS
Papers that mentioned: 1
bioconductor: MiRaGE
MiRNA Ranking by Gene Expression
Papers that mentioned: 1
cran: MSCMT
Multivariate Synthetic Control Method Using Time Series
Papers that mentioned: 1
cran: JPEN
Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty
Papers that mentioned: 1
cran: msgps
Degrees of Freedom of Elastic Net, Adaptive Lasso and Generalized Elastic Net
Papers that mentioned: 1
cran: JOUSBoost
Implements Under/Oversampling for Probability Estimation
Papers that mentioned: 1
cran: JOPS
Practical Smoothing with P-Splines
Papers that mentioned: 1
cran: JFE
Tools and GUI for Analyzing Time Series Data of Just Finance and Econometrics
Papers that mentioned: 1
cran: jenga
Fast Extrapolation of Time Features using K-Nearest Neighbors
Papers that mentioned: 1
cran: FeatureImpCluster
Feature Importance for Partitional Clustering
Papers that mentioned: 1
bioconductor: MineICA
Analysis of an ICA decomposition obtained on genomics data
Papers that mentioned: 1
cran: KRMM
Kernel Ridge Mixed Model
Papers that mentioned: 1
cran: MSwM
Fitting Markov Switching Models
Papers that mentioned: 1
bioconductor: MGFR
Marker Gene Finder in RNA-seq data
Papers that mentioned: 1
cran: MTAR
Multi-Trait Analysis of Rare-Variant Association Study
Papers that mentioned: 1
cran: jarbes
Just a Rather Bayesian Evidence Synthesis
Papers that mentioned: 1
bioconductor: methimpute
Imputation-guided re-construction of complete methylomes from WGBS data
Papers that mentioned: 1
bioconductor: metavizr
R Interface to the metaviz web app for interactive metagenomics data analysis and visualization
Papers that mentioned: 1
cran: mtsdi
Multivariate Time Series Data Imputation
Papers that mentioned: 1
bioconductor: metaseqR2
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms
Papers that mentioned: 1
cran: fdth
Frequency Distribution Tables, Histograms and Polygons
Papers that mentioned: 1
cran: jackstraw
Statistical Inference for Unsupervised Learning
Papers that mentioned: 1
bioconductor: MethTargetedNGS
Perform Methylation Analysis on Next Generation Sequencing Data
Papers that mentioned: 1
cran: iva
Instrumental Variable Analysis in Case-Control Association Studies
Papers that mentioned: 1
pypi: Anemone
Monitor long running analyses by remote plotting of selected variables
Papers that mentioned: 1
pypi: bubble
cli tool to bubble information from one to another service, with rule based transformations ">>>"
Papers that mentioned: 1
cran: iteRates
Parametric rate comparison
Papers that mentioned: 1
pypi: Anika
this is just a test, please ignore it
Papers that mentioned: 1
pypi: ani.py
Python interface for anime APIs
Papers that mentioned: 1
pypi: anki

Papers that mentioned: 1
cran: isqg
In Silico Quantitative Genetics
Papers that mentioned: 1
cran: IsoCorr
Correcting Drift and Carry-over in Continuous Isotopic Measurements
Papers that mentioned: 1
cran: isocat
Isotope Origin Clustering and Assignment Tools
Papers that mentioned: 1
cran: isni
Index of Local Sensitivity to Nonignorability
Papers that mentioned: 1
pypi: apap
Declarative and handy RESTful client factory
Papers that mentioned: 1
pypi: annotations
Multimodal stimulus annotation in Python
Papers that mentioned: 1
bioconductor: MesKit
A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic alterations
Papers that mentioned: 1
pypi: anonymous
A python library with tools.
Papers that mentioned: 1
bioconductor: MeSHDbi
DBI to construct MeSH-related package from sqlite file
Papers that mentioned: 1
pypi: antools
Private library which is also free to public use. Its purpose is to be useful code keeper.
Papers that mentioned: 1
bioconductor: DeepBlueR
DeepBlueR
Papers that mentioned: 1
pypi: any
Command Line Interface for Anyscale
Papers that mentioned: 1
pypi: ao
a minimal example package (pure python version)
Papers that mentioned: 1
pypi: aoa
Python client for Teradata AnalyticOps Accelerator (AOA)
Papers that mentioned: 1
bioconductor: MEIGOR
MEIGO - MEtaheuristics for bIoinformatics Global Optimization
Papers that mentioned: 1
pypi: bubbles
Virtual Data Object framework for data processing (ETL) and quality monitoring
Papers that mentioned: 1
cran: irrNA
Coefficients of Interrater Reliability – Generalized for Randomly Incomplete Datasets
Papers that mentioned: 1
cran: multicolor
Add Multiple Colors to your Console & RMarkdown Output
Papers that mentioned: 1
cran: irrICC
Intraclass Correlations for Quantifying Inter-Rater Reliability
Papers that mentioned: 1
cran: multiDimBio
Multivariate Analysis and Visualization for Biological Data
Papers that mentioned: 1
bioconductor: MCbiclust
Massive correlating biclusters for gene expression data and associated methods
Papers that mentioned: 1
cran: multigroup
Multigroup Data Analysis
Papers that mentioned: 1
cran: MultiJoin
Enables Efficient Joining of Data File on Common Fields using the Unix Utility Join
Papers that mentioned: 1
cran: IRISSeismic
Classes and Methods for Seismic Data Analysis
Papers that mentioned: 1
cran: iqLearn
Interactive Q-Learning
Papers that mentioned: 1
cran: multiMarker
Latent Variable Model to Infer Food Intake from Multiple Biomarkers
Papers that mentioned: 1
cran: parfm
Parametric Frailty Models
Papers that mentioned: 1
cran: IPPP
Inhomogeneous Poisson Point Processes
Papers that mentioned: 1
cran: IPDfromKM
Map Digitized Survival Curves Back to Individual Patient Data
Papers that mentioned: 1
cran: multiPIM
Variable Importance Analysis with Population Intervention Models
Papers that mentioned: 1
cran: parsec
Partial Orders in Socio-Economics
Papers that mentioned: 1
cran: MultiRNG
Multivariate Pseudo-Random Number Generation
Papers that mentioned: 1
cran: InvariantCausalPrediction
Invariant Causal Prediction
Papers that mentioned: 1
cran: multiselect
Selecting Combinations of Predictors by Leveraging Multiple AUCs for an Ordered Multilevel Outcome
Papers that mentioned: 1
cran: multisensi
Multivariate Sensitivity Analysis
Papers that mentioned: 1
cran: partDSA
Partitioning Using Deletion, Substitution, and Addition Moves
Papers that mentioned: 1
cran: partialOR
Partial Odds Ratio
Papers that mentioned: 1
cran: multiway
Component Models for Multi-Way Data
Papers that mentioned: 1
cran: partitionBEFsp
Methods for Calculating the Loreau & Hector 2001 BEF Partition
Papers that mentioned: 1
cran: MultNonParam
Multivariate Nonparametric Methods
Papers that mentioned: 1
cran: multxpert
Common Multiple Testing Procedures and Gatekeeping Procedures
Papers that mentioned: 1
cran: intubate
Interface to Popular R Functions for Data Science Pipelines
Papers that mentioned: 1
cran: intRvals
Analysis of Time-Ordered Event Data with Missed Observations
Papers that mentioned: 1
cran: intrinsicDimension
Intrinsic Dimension Estimation
Papers that mentioned: 1
cran: interpretR
Binary Classifier and Regression Model Interpretation Functions
Papers that mentioned: 1
pypi: aphrodite
ENOS API
Papers that mentioned: 1
cran: partitionMetric
Compute a distance metric between two partitions of a set
Papers that mentioned: 1
cran: interim
Scheduling Interim Analyses in Clinical Trials
Papers that mentioned: 1
cran: IntegratedMRF
Integrated Prediction using Uni-Variate and Multivariate Random Forests
Papers that mentioned: 1
cran: Infusion
Inference Using Simulation
Papers that mentioned: 1
bioconductor: maPredictDSC
Phenotype prediction using microarray data: approach of the best overall team in the IMPROVER Diagnostic Signature Challenge
Papers that mentioned: 1
bioconductor: mAPKL
A Hybrid Feature Selection method for gene expression data
Papers that mentioned: 1
pypi: Brill
The Brill API
Papers that mentioned: 1
pypi: apriori
implimention of apriori in python
Papers that mentioned: 1
pypi: aps
APS Journals API in Python for Humans.
Papers that mentioned: 1
pypi: AQoPA
Automated Quality of Protection Analysis Tool for QoP-ML models.
Papers that mentioned: 1
bioconductor: LymphoSeq
Analyze high-throughput sequencing of T and B cell receptors
Papers that mentioned: 1
pypi: arachnid
Single Particle Data Analysis Suite
Papers that mentioned: 1
pypi: arcane
Python library for creating dynamic websites.
Papers that mentioned: 1
cran: independence
Fast Rank-Based Independence Testing
Papers that mentioned: 1
cran: fdrci
Permutation-Based FDR Point and Confidence Interval Estimation
Papers that mentioned: 1
bioconductor: lpNet
Linear Programming Model for Network Inference
Papers that mentioned: 1
pypi: Archiver
Manage files based on their SHA1 hashes
Papers that mentioned: 1
pypi: Ardi
A Python module created by Muhammad Ardi Putra. Currently working on machine learning and computer vision
Papers that mentioned: 1
bioconductor: LPEadj
A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size.
Papers that mentioned: 1
pypi: arff
Python package for reading and writing Weka arff files
Papers that mentioned: 1
pypi: arg
Parse command line arguments made easier...
Papers that mentioned: 1
bioconductor: LoomExperiment
LoomExperiment container
Papers that mentioned: 1