Packages with Software Mentions in Scientific Papers

pypi: cells

Terminal cells tools
Papers that mentioned: 1

Very Likely Science (65)

pypi: GeneXpress

A unified set of analysis and visualization tools intended for gene expression studies in Python, and an interface to the R ExpressionSet.
Papers that mentioned: 1

Very Likely Science (75)

cran: paramlink

Parametric Linkage and Other Pedigree Analysis in R
Papers that mentioned: 1

Very Likely Science (85)

pypi: proteus

Library to access Tryton server as a client
Papers that mentioned: 1

Very Likely Science (65)

pypi: viscm

A colormap tool
Papers that mentioned: 1

Very Likely Science (80)

pypi: openms

A minimal implementation of OpenManuscript capabilities.
Papers that mentioned: 1

Very Likely Science (65)

pypi: drawing

Python library for creating and manipulating graphs
Papers that mentioned: 1

Very Likely Science (65)

pypi: gdecomp

Gaussian Decompostion of a LiDAR Waveform
Papers that mentioned: 1

Very Likely Science (80)

pypi: youtube

Papers that mentioned: 1

Unlikely Science (0)

pypi: gather

A gatherer
Papers that mentioned: 1

Very Likely Science (65)

pypi: Gavagai

A Gavagai API helper library.
Papers that mentioned: 1

Very Likely Science (80)

pypi: Drum

A Reddit / Hacker News clone for Django.
Papers that mentioned: 1

Very Likely Science (65)

pypi: vilya

Monitoring for Elrond Network nodes
Papers that mentioned: 1

Very Likely Science (75)

pypi: microhapdb

Portable database of microhaplotype marker and allele frequency data
Papers that mentioned: 1

Very Likely Science (100)

pypi: pych

Python 2ch API client.
Papers that mentioned: 1

Very Likely Science (65)

pypi: eager

Papers that mentioned: 1

Very Likely Science (65)

pypi: fz

Quick and efficient lambda functions.
Papers that mentioned: 1

Very Likely Science (65)

pypi: idtrackerai

Idtracker.ai tracks up to 100 unmarked animals from videos recorded in laboratory conditions using artificial intelligence. Free and open source.
Papers that mentioned: 1

Very Likely Science (100)

pypi: ebook

ebook library for mobi and epub
Papers that mentioned: 1

Very Likely Science (65)

pypi: alns

A flexible implementation of the adaptive large neighbourhood search (ALNS) algorithm.
Papers that mentioned: 1

Very Likely Science (100)

cran: NPCirc

Nonparametric Circular Methods
Papers that mentioned: 1

Very Likely Science (75)

pypi: centreseq

Fast generation of a core genome among bacterial strains
Papers that mentioned: 1

Very Likely Science (100)

pypi: ie

Validation of brazilian state registration numbers
Papers that mentioned: 1

Very Likely Science (60)

pypi: pycld2

Python bindings around Google Chromium's embedded compact language detection library (CLD2)
Papers that mentioned: 1

Very Likely Science (80)

pypi: pycryptodomex

Cryptographic library for Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: eda

A Python framework for event-driven architectures.
Papers that mentioned: 1

Very Likely Science (65)

pypi: fuzzer

Python wrapper for multiarch AFL
Papers that mentioned: 1

Very Likely Science (65)

cran: npbr

Nonparametric Boundary Regression
Papers that mentioned: 1

Very Likely Science (85)

pypi: pydvh

pyDVH is a package for parsing DVH files.
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyGrid

A Library for Private, Secure Deep Learning
Papers that mentioned: 1

Very Likely Science (96)

pypi: Cerberus

Lightweight, extensible schema and data validation tool for Pythondictionaries.
Papers that mentioned: 1

Very Likely Science (65)

pypi: elda

A data analysis focused language built with Python
Papers that mentioned: 1

Very Likely Science (75)

pypi: staNMF

python 2.7 implementation of stability NMF (Siqi Wu 2016)
Papers that mentioned: 1

Very Likely Science (100)

pypi: friendly

Friendlier tracebacks in any language.
Papers that mentioned: 1

Very Likely Science (65)

pypi: micropath

The micropath Web Application Framework
Papers that mentioned: 1

Very Likely Science (85)

pypi: Pygments

Pygments is a syntax highlighting package written in Python.
Papers that mentioned: 1

Very Likely Science (100)

pypi: cflib

Crazyflie python driver
Papers that mentioned: 1

Very Likely Science (100)

pypi: MicroPipe

A package for automated microbe bioinfomatics Analysis
Papers that mentioned: 1

Very Likely Science (75)

pypi: pygames

Papers that mentioned: 1

Unlikely Science (0)

pypi: cflib-pomo

Counts file library and conversion scripts.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pygarrayimage

Allow numpy arrays as source of texture data for pyglet.
Papers that mentioned: 1

Very Likely Science (65)

pypi: rtg

Reader Translator Generator(RTG), a Neural Machine Translator(NMT) toolkit based on Pytorch
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyiron

pyiron - an integrated development environment (IDE) for computational materials science.
Papers that mentioned: 1

Very Likely Science (100)

cran: RNAsmc

RNA Secondary Structure Module Mining, Comparison and Plotting
Papers that mentioned: 1

Very Likely Science (85)

pypi: pyhf

pure-Python HistFactory implementation with tensors and autodiff
Papers that mentioned: 1

Very Likely Science (100)

pypi: cf-python

A CF-compliant earth science data analysis library
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyhrf

Analysis of fMRI data based on the study of hemodynamics
Papers that mentioned: 1

Very Likely Science (65)

pypi: RTOC

RealTime OpenControl
Papers that mentioned: 1

Very Likely Science (80)

cran: RM2

Papers that mentioned: 1

Unlikely Science (0)

cran: ridigbio

Interface to the iDigBio Data API
Papers that mentioned: 1

Very Likely Science (100)

pypi: microSALT

Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.
Papers that mentioned: 1

Very Likely Science (90)

pypi: TimeSeriesAnalyzer

Papers that mentioned: 1

Unlikely Science (0)

pypi: cfs

Codeforces cli for lazy nerds who don't want to leave their cozy terminals.
Papers that mentioned: 1

Very Likely Science (65)

pypi: rtools

utilities to ease manipulation of R packages using rpy2.
Papers that mentioned: 1

Very Likely Science (80)

pypi: timsdata

Papers that mentioned: 1

Unlikely Science (0)

pypi: tims

Description.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pymix

PyMix -- Python mixture package
Papers that mentioned: 1

Very Likely Science (65)

pypi: vquest

Automate IMGT V-QUEST usage on imgt.org
Papers that mentioned: 1

Very Likely Science (100)

pypi: bunch

A dot-accessible dictionary (a la JavaScript objects)
Papers that mentioned: 1

Very Likely Science (65)

pypi: bumps

Data fitting with bayesian uncertainty analysis
Papers that mentioned: 1

Very Likely Science (90)

pypi: gethub

Clone all of your GitHub repositories
Papers that mentioned: 1

Very Likely Science (65)

pypi: LiveStats

LiveStats solves the problem of generating accurate statistics for when your data set is too large to fit in memory, or too costly to sort.
Papers that mentioned: 1

Very Likely Science (75)

pypi: GetIsolationSources

Retrieves isolation sources from NCBI given the set of sequences with specified accession numbers. Both nucleotide and protein accessions are accepted.
Papers that mentioned: 1

Likely Science (55)

pypi: ToE

An edge-cloud collaborative training system for CNN and other DNNs.
Papers that mentioned: 1

Very Likely Science (65)

pypi: toffee

Toffee: Test Object Fixture Factories - easy creation of data fixtures for tests
Papers that mentioned: 1

Very Likely Science (65)

pypi: tokenizers

💥 Fast State-of-the-Art Tokenizers optimized for Research and Production
Papers that mentioned: 1

Very Likely Science (100)

pypi: equivalence

Equivalence relations
Papers that mentioned: 1

Very Likely Science (65)

pypi: forests

Variations on Random Forests for classification / regression
Papers that mentioned: 1

Very Likely Science (75)

cran: norm2

Analysis of Incomplete Multivariate Data under a Normal Model
Papers that mentioned: 1

Very Likely Science (85)

pypi: toil-cwl-runner

Pipeline management software for clusters using CWL.
Papers that mentioned: 1

Very Likely Science (100)

pypi: tomopy

Papers that mentioned: 1

Unlikely Science (0)

pypi: fmt

f-strings(Python 3.6) style literal string interpolation.
Papers that mentioned: 1

Likely Science (40)

cran: processR

Implementation of the 'PROCESS' Macro
Papers that mentioned: 1

Very Likely Science (75)

pypi: getit

A cross platform CLI downloader tool written in python.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyobs

Python library to communicate with an obs-websocket server.
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyNEURON

A Python package version of NEURON, for empirically-based simulations of neurons and networks of neurons
Papers that mentioned: 1

Very Likely Science (90)

pypi: PyOPUS

A simulation-based design optimization library
Papers that mentioned: 1

Very Likely Science (75)

pypi: pypint

Python interface to Pint
Papers that mentioned: 1

Very Likely Science (80)

pypi: cha

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: klar

a micro web framework
Papers that mentioned: 1

Very Likely Science (65)

pypi: BulkSMS

BulkSMS.co.uk Python implementation.
Papers that mentioned: 1

Very Likely Science (65)

pypi: vnet

Papers that mentioned: 1

Unlikely Science (0)

pypi: PyPTS

Python toolbox for plant tissue simulation prototypes
Papers that mentioned: 1

Very Likely Science (75)

pypi: pypot

Python 3 Library for Robot Control
Papers that mentioned: 1

Very Likely Science (90)

pypi: pyproj

Python interface to PROJ (cartographic projections and coordinate transformations library)
Papers that mentioned: 1

Very Likely Science (100)

pypi: essentials

General purpose classes and functions, reusable in any kind of Python application
Papers that mentioned: 1

Very Likely Science (80)

pypi: gevent

Coroutine-based network library
Papers that mentioned: 1

Very Likely Science (90)

pypi: pystackreg

Image registration tool (python implementation of the ImageJ/FIJI Plugin TurboReg/StackReg)
Papers that mentioned: 1

Very Likely Science (100)

pypi: pytesseract

Python-tesseract is a python wrapper for Google's Tesseract-OCR
Papers that mentioned: 1

Very Likely Science (65)

pypi: flopy

FloPy is a Python package to create, run, and post-process MODFLOW-based models
Papers that mentioned: 1

Very Likely Science (100)

pypi: omx

Declarative XML parsing and serialization
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyTFM

traction force microscopy and monolayer stress microscopy of cell sheets and isolated patches
Papers that mentioned: 1

Very Likely Science (65)

pypi: rules

Awesome Django authorization, without the database
Papers that mentioned: 1

Very Likely Science (85)

pypi: python-twitter

A Python wrapper around the Twitter API
Papers that mentioned: 1

Very Likely Science (100)

pypi: FizzBuzz

Papers that mentioned: 1

Unlikely Science (0)

pypi: gfit

Fast multi-gaussian curve fitting
Papers that mentioned: 1

Very Likely Science (80)

pypi: pyusb

Python USB access module
Papers that mentioned: 1

Very Likely Science (100)

pypi: PyVISA

Python VISA bindings for GPIB, RS232, TCPIP and USB instruments
Papers that mentioned: 1

Very Likely Science (80)

pypi: Vulnerable

Papers that mentioned: 1

Very Likely Science (65)

pypi: zCurve

zCurve maps multidimensional data to one dimension while preserving locality of the data points.
Papers that mentioned: 1

Very Likely Science (85)