Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi: dxf
Python library to generate DXF drawing files (CAD)
Papers that mentioned: 1
pypi: dtools
Wrapper object around relativedelta to manage date and datetime strings
Papers that mentioned: 1
pypi: scikit-ribo
A scikit framework for joint analysis of Riboseq and RNAseq data
Papers that mentioned: 1
pypi: dtoolcore
Core API for managing (scientific) data
Papers that mentioned: 1
pypi: scikit-spectra
Spectroscopy in Python built on Pandas.
Papers that mentioned: 1
pypi: Scoot
Scoot library for connecting to a local Scoot Daemon Server
Papers that mentioned: 1
pypi: selfea

Papers that mentioned: 1
pypi: wildcat
Wildcat Python SDK to Use Annealers
Papers that mentioned: 1
pypi: scikit-surgerycore
scikit-surgerycore contains commonly used Image Guided Surgery algorithms and tools
Papers that mentioned: 1
pypi: dtd
Python package to patch all the internal functions to ignore .DS_Store file in Mac
Papers that mentioned: 1
pypi: scikit-surgeryimage
scikit-surgeryimage implements image processing tools and alogrithms for Image Guided Surgery.
Papers that mentioned: 1
pypi: dt
Dynatrace API Python client
Papers that mentioned: 1
pypi: scikit-surgerynditracker
Interface for Northern Digital (NDI) Trackers with data to NumPy arrays
Papers that mentioned: 1
pypi: scikit-surgeryspeech
Interface to speech services for image-guided surgery.
Papers that mentioned: 1
pypi: scop
Wrapper of SCOP(Solver for COnstraint Programing)
Papers that mentioned: 1
pypi: scikit-surgeryutils
scikit-surgeryutils - Tests/demos utilities, based around opencv-contrib-python-headless and PySide6
Papers that mentioned: 1
pypi: dspack
Python Package of datastructures inbuilt
Papers that mentioned: 1
pypi: scikit-surgeryvtk
scikit-surgeryvtk implements VTK for Image Guided Surgery applications
Papers that mentioned: 1
pypi: dsr
Automatically gegerate repr to show data structures espelly trees
Papers that mentioned: 1
pypi: DRV
Discrete random variables in Python made easy.
Papers that mentioned: 1
pypi: scot
EEG/MEG Source Connectivity Toolbox
Papers that mentioned: 1
pypi: Drum
A Reddit / Hacker News clone for Django.
Papers that mentioned: 1
pypi: scikit-ued
Collection of algorithms and functions for ultrafast electron scattering
Papers that mentioned: 1
pypi: scott

Papers that mentioned: 1
pypi: drop
Uploads data to a remote www directory via scp and returns a public url.
Papers that mentioned: 1
pypi: WordInfo
A library to find defintions, pos, synonyms, antonyms, and word origins. It is python 3 compatible and requires bs4 and urllib.request
Papers that mentioned: 1
pypi: ScreenRecorder
A screen recorder.
Papers that mentioned: 1
pypi: drawing
Python library for creating and manipulating graphs
Papers that mentioned: 1
pypi: scikit-network
Graph algorithms
Papers that mentioned: 1
pypi: droid
Droid is a remote communication application created to communicate with Android devices on the local network over the Android debug bridge (adb). Available as a CLI or GUI.
Papers that mentioned: 1
pypi: dreamtools
Scoring functions for the DREAM / SAGE challenges
Papers that mentioned: 1
pypi: dream
UNKNOWN
Papers that mentioned: 1
pypi: scripting
A set of shell utilities that makes working on python scripts a breeze
Papers that mentioned: 1
pypi: echarts
A echarts Python project
Papers that mentioned: 1
pypi: dpy
A tool that automatically generates quality documentation for Python projects.
Papers that mentioned: 1
pypi: displayer
Batch display library for images in a directory
Papers that mentioned: 1
pypi: discord
A mirror package for discord.py. Please install that instead.
Papers that mentioned: 1
pypi: disc
A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learning.
Papers that mentioned: 1
pypi: selforgmap
self organizing maps
Papers that mentioned: 1
pypi: WiPi
A general use class based WPA network manager
Papers that mentioned: 1
pypi: SciPhy
Science stuff
Papers that mentioned: 1
pypi: dps
Papers that mentioned: 1
pypi: scluster
an implementation of spectral clustering for text document collections
Papers that mentioned: 1
pypi: down
A CLI tool to check if a site or a list of sites are down or up
Papers that mentioned: 1
pypi: ecstatic
A small flask application to serve files.
Papers that mentioned: 1
pypi: dpr
Implementation of "Reducing variability in along-tract analysis with diffusion profile realignment".
Papers that mentioned: 1
pypi: scpt
A toolbox to help keep the verbosity down when porting Bash scripts to Python
Papers that mentioned: 1
pypi: dplot
Plots Gromacs SAXS, Pepsi-SAXS, Crysol and Debyer SWAXS intensity curves
Papers that mentioned: 1
pypi: script.py
Simple handwriting labeling job
Papers that mentioned: 1
pypi: dpl
A library for building readable and concise data pipelines
Papers that mentioned: 1
pypi: wordnet
An module to create network of words on bases of realtive sense under a corpus of document.
Papers that mentioned: 1
pypi: seqanpy
Fast pairwise sequence alignment using SeqAn
Papers that mentioned: 1
pypi: SeqFindr
A tool to easily create informative genomic feature plots
Papers that mentioned: 1
pypi: wordpad
Adds padding to the right or left of a given string
Papers that mentioned: 1
pypi: wradlib
wradlib - An Open Source Library for Weather Radar Data Processing
Papers that mentioned: 1
pypi: dime
Virtual Desktop time tracker
Papers that mentioned: 1
pypi: dim
Docker Image Monitor
Papers that mentioned: 1
pypi: doppler
A raw SQL migration toolfor managing your database without an ORM.
Papers that mentioned: 1
pypi: doppel
A friendly file copier/installer
Papers that mentioned: 1
pypi: doodle
A library to segment objects in an image in a semi-automated fashion.
Papers that mentioned: 1
pypi: SCNIC
A tool for finding and summarizing modules of highly correlated observations in compositional data
Papers that mentioned: 1
pypi: dpkt
fast, simple packet creation / parsing, with definitions for the basic TCP/IP protocols
Papers that mentioned: 1
pypi: scobra
Supplementary package for COBRApy
Papers that mentioned: 1
pypi: scorecard
PMML Scorecard generator
Papers that mentioned: 1
pypi: donut
Makes symlinks to dotfiles.
Papers that mentioned: 1
pypi: scorecardpy
Credit Risk Scorecard
Papers that mentioned: 1
pypi: scratch
Interface Python with MIT Scratch 1.3+ (not 2.x)
Papers that mentioned: 1
pypi: dongle
Papers that mentioned: 1
pypi: scribe
Log like it's going out of style
Papers that mentioned: 1
pypi: screed
a Python library for loading FASTA and FASTQ sequences
Papers that mentioned: 1
pypi: don
Dot Object Notation (DON) parser.
Papers that mentioned: 1
pypi: Domo
Domo is a web crawler & archiver
Papers that mentioned: 1
pypi: scv
better package manager - python package manager
Papers that mentioned: 1
pypi: SDDetector
lightweight video detection
Papers that mentioned: 1
pypi: scvi
Single-cell Variational Inference
Papers that mentioned: 1
pypi: dota2
Module for interacting Dota2's Game Coordinator
Papers that mentioned: 1
pypi: domaincaller
A python implementation of original DI-based domain caller proposed by Dixon et al. (2012)
Papers that mentioned: 1
pypi: scvi-tools
Deep probabilistic analysis of single-cell omics data.
Papers that mentioned: 1
pypi: sdb
A socket-based remote debugger for Python
Papers that mentioned: 1
pypi: domain
Python client for the Domain property API
Papers that mentioned: 1
pypi: sde
A CLI tool to edit simple JSON and YAML data files
Papers that mentioned: 1
pypi: draft

Papers that mentioned: 1
pypi: DriverPower
Combined burden and functional test for coding and noncoding cancer drivers
Papers that mentioned: 1
pypi: dos2unix
convert dos linefeeds (crlf) to unix (lf)
Papers that mentioned: 1
pypi: Dogecoin

Papers that mentioned: 1
pypi: dog
dog is a simple wrapper for "docker run" to make it simple to call tools residing inside docker containers
Papers that mentioned: 1
pypi: dsh
console application to organize commands and environments
Papers that mentioned: 1
pypi: docutils
Docutils -- Python Documentation Utilities
Papers that mentioned: 1
pypi: ecp
Eraple ECP (e-Commerce Platform)
Papers that mentioned: 1
pypi: sdmx
Read SDMX XML files
Papers that mentioned: 1
pypi: drawio
drawio: plot networkx graphs with diagrams.net
Papers that mentioned: 1
pypi: DStream
An experimental Java-8-stream-like lib.
Papers that mentioned: 1
pypi: wq
A modular framework for mobile surveys and field data collection via offline-capable mobile web apps.
Papers that mentioned: 1
pypi: dnaio
Read and write FASTA and FASTQ files efficiently
Papers that mentioned: 1
pypi: ecd
the english translate tool
Papers that mentioned: 1
pypi: sdt_metrics
Signal Detection Theory (SDT) metrics for Python
Papers that mentioned: 1
pypi: sealed
An example
Papers that mentioned: 1
pypi: EasyStats
Gaussian and Binomial distributions
Papers that mentioned: 1
pypi: dnachisel
Optimize DNA sequences under constraints.
Papers that mentioned: 1
pypi: dms2dfe
Pipeline to analyse Deep Mutational Scanning (DMS) experiments in terms of Distribution of Fitness Effects (DFE)
Papers that mentioned: 1