Packages with Software Mentions in Scientific Papers

cran: glycanr

Tools for Analysing N-Glycan Data
Papers that mentioned: 1

Very Likely Science (91)

pypi: mediator

A library implements the Mediator pattern to make your code extensible
Papers that mentioned: 1

Very Likely Science (65)

pypi: FortyTwo

This is the module containing 1m0r74l17y's stuff.
Papers that mentioned: 1

Very Likely Science (65)

pypi: biopy-isatab

Python parser for ISAtab, a biological file format for experimental metadata
Papers that mentioned: 1

Very Likely Science (75)

pypi: forward

Tool for gene-based phenomic experiments using cohorts.
Papers that mentioned: 1

Very Likely Science (90)

bioconductor: GladiaTOX

R Package for Processing High Content Screening data
Papers that mentioned: 1

Very Likely Science (75)

pypi: relationships

redis backed user relationships
Papers that mentioned: 1

Very Likely Science (65)

pypi: hypergraph

Reversed mode second order automatic differentiation for python
Papers that mentioned: 1

Very Likely Science (65)

pypi: eva

Plugin for virtualenvwrapper to automatically set environment variables from a .env found in your project's folder as set by virtualenvwrapper's project_path (-a) option.
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: graper

Adaptive penalization in high-dimensional regression and classification with external covariates using variational Bayes
Papers that mentioned: 1

Very Likely Science (100)

pypi: medic

A command line tool to manage a PubMed DB mirror.
Papers that mentioned: 1

Very Likely Science (100)

pypi: sts

STS - Smart Trading System
Papers that mentioned: 1

Very Likely Science (65)

cran: GreedyEPL

Greedy Expected Posterior Loss
Papers that mentioned: 1

Very Likely Science (75)

cran: grf

Generalized Random Forests
Papers that mentioned: 1

Very Likely Science (100)

pypi: fplanck

Solve the Fokker-Planck equation in N dimensions
Papers that mentioned: 1

Very Likely Science (100)

pypi: biotracks

Data package representation for cell migration tracking data
Papers that mentioned: 1

Very Likely Science (65)

pypi: bird

BIRD
Papers that mentioned: 1

Very Likely Science (80)

bioconductor: ImmuneSpaceR

A Thin Wrapper around the ImmuneSpace Data and Tools Portal
Papers that mentioned: 1

Very Likely Science (100)

pypi: ontoviz

A simple ontology and RDF visualization tool.
Papers that mentioned: 1

Very Likely Science (85)

pypi: birdseye

Graphical Python debugger which lets you easily view the values of all evaluated expressions
Papers that mentioned: 1

Very Likely Science (95)

cran: gridtext

Improved Text Rendering Support for 'Grid' Graphics
Papers that mentioned: 1

Very Likely Science (85)

cran: gsalib

Utility Functions for 'GATK'
Papers that mentioned: 1

Very Likely Science (90)

cran: gsbDesign

Group Sequential Bayes Design
Papers that mentioned: 1

Very Likely Science (75)

Festival management application: Tickets E-Commerce, Tickets validation on Lobby (Web, Paper, Guest, Local Purchase) and Sells on Wristband/Card (Beverage, Food, Souvenir, etc).
Papers that mentioned: 1

Likely Science (40)

bioconductor: KBoost

Inference of gene regulatory networks from gene expression data
Papers that mentioned: 1

Very Likely Science (100)

cran: microeco

Microbial Community Ecology Data Analysis
Papers that mentioned: 1

Very Likely Science (100)

pypi: remodnav

robust eye movement detection for natural viewing
Papers that mentioned: 1

Very Likely Science (81)

pypi: blackjack

Red-black trees
Papers that mentioned: 1

Very Likely Science (65)

pypi: renderer

A Bridge that allows devs to seamlessly write code that is python 2,3 compatible; with respect to the subtle variations (especially str) in data type representations between the two base versions of python.
Papers that mentioned: 1

Very Likely Science (65)

cran: hierarchicalDS

Functions to Perform Hierarchical Analysis of Distance Sampling Data
Papers that mentioned: 1

Very Likely Science (85)

pypi: Fraction

Fraction carries out all the fraction operations including addition, subtraction, multiplication, division, reciprocation
Papers that mentioned: 1

Very Likely Science (80)

cran: TSPred

Functions for Benchmarking Time Series Prediction
Papers that mentioned: 1

Very Likely Science (75)

cran: hilldiv

Integral Analysis of Diversity Based on Hill Numbers
Papers that mentioned: 1

Very Likely Science (100)

cran: HistogramTools

Utility Functions for R Histograms
Papers that mentioned: 1

Likely Science (50)

pypi: repcomp

A package for comparing trained embedding models.
Papers that mentioned: 1

Very Likely Science (65)

cran: hitandrun

"Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes
Papers that mentioned: 1

Very Likely Science (77)

cran: nlsem

Fitting Structural Equation Mixture Models
Papers that mentioned: 1

Very Likely Science (85)

cran: nlt

A Nondecimated Lifting Transform for Signal Denoising
Papers that mentioned: 1

Very Likely Science (75)

cran: IC2

Inequality and Concentration Indices and Curves
Papers that mentioned: 1

Very Likely Science (75)

cran: ICAOD

Optimal Designs for Nonlinear Statistical Models by Imperialist Competitive Algorithm (ICA)
Papers that mentioned: 1

Very Likely Science (85)

cran: ICGE

Estimation of Number of Clusters and Identification of Atypical Units
Papers that mentioned: 1

Very Likely Science (75)

pypi: RepeatFS

File system providing reproducibility through provenance and automation
Papers that mentioned: 1

Very Likely Science (95)

cran: iFad

An integrative factor analysis model for drug-pathway association inference
Papers that mentioned: 1

Very Likely Science (85)

pypi: powspec

Power Spectrum
Papers that mentioned: 1

Very Likely Science (65)

pypi: epa

Python wrapper for the multiple APIs available through the EPA's website.
Papers that mentioned: 1

Unlikely Science (15)

cran: iglu

Interpreting Glucose Data from Continuous Glucose Monitors
Papers that mentioned: 1

Very Likely Science (100)

pypi: repertoire

Spaced repetition in plain text
Papers that mentioned: 1

Very Likely Science (65)

pypi: franklin

Retrieve scientific papers and manage associated citations.
Papers that mentioned: 1

Very Likely Science (95)

cran: imbalance

Preprocessing Algorithms for Imbalanced Datasets
Papers that mentioned: 1

Very Likely Science (87)

cran: NMOF

Numerical Methods and Optimization in Finance
Papers that mentioned: 1

Very Likely Science (85)

bioconductor: LineagePulse

Differential expression analysis and model fitting for single-cell RNA-seq data
Papers that mentioned: 1

Very Likely Science (100)

pypi: replace

multiple replace
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: lionessR

Modeling networks for individual samples using LIONESS
Papers that mentioned: 1

Very Likely Science (100)

pypi: eems

eems - easy energy monitoring system
Papers that mentioned: 1

Very Likely Science (80)

cran: nodbi

'NoSQL' Database Connector
Papers that mentioned: 1

Very Likely Science (75)

bioconductor: LPEadj

A correction of the local pooled error (LPE) method to replace the asymptotic variance adjustment with an unbiased adjustment based on sample size.
Papers that mentioned: 1

Very Likely Science (100)

pypi: replication

A prototype object replication lib
Papers that mentioned: 1

Very Likely Science (65)

cran: nodiv

Compares the Distribution of Sister Clades Through a Phylogeny
Papers that mentioned: 1

Very Likely Science (70)

pypi: FRB

Federal Reserve Economic Data (FRED)
Papers that mentioned: 1

Very Likely Science (85)

cran: noise

Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data
Papers that mentioned: 1

Very Likely Science (75)

pypi: ORG.asm

A de novo assembler dedicated to organelle genome assembling
Papers that mentioned: 1

Very Likely Science (80)

pypi: epc

EPC (RPC stack for Emacs Lisp) implementation in Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: fred

St. Louis Federal Reserve FRED API
Papers that mentioned: 1

Very Likely Science (65)

cran: insect

Informatic Sequence Classification Trees
Papers that mentioned: 1

Very Likely Science (100)

pypi: ephypype

Python package providing pipelines for electrophysiological (EEG/MEG) data within nipype framework.
Papers that mentioned: 1

Very Likely Science (65)

pypi: reports

Quickly create HTML reports using a set of JINJA templates
Papers that mentioned: 1

Very Likely Science (80)

cran: nopaco

Non-Parametric Concordance Coefficient
Papers that mentioned: 1

Very Likely Science (75)

cran: interpretR

Binary Classifier and Regression Model Interpretation Functions
Papers that mentioned: 1

Very Likely Science (60)

pypi: synpy

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: freeform

natural interpretation of loosely structured user phrases
Papers that mentioned: 1

Unlikely Science (15)

pypi: oops

OOPS report model and default allocation/[de]serialization.
Papers that mentioned: 1

Very Likely Science (65)

pypi: srv

Serve a directory with one command
Papers that mentioned: 1

Very Likely Science (85)

pypi: eco

Python Eco is a bridge to the ECO(CoffeeScript Template) Compiler.
Papers that mentioned: 1

Very Likely Science (65)

cran: nprobust

Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation
Papers that mentioned: 1

Very Likely Science (93)

cran: IsoriX

Isoscape Computation and Inference of Spatial Origins using Mixed Models
Papers that mentioned: 1

Likely Science (50)

cran: iteRates

Parametric rate comparison
Papers that mentioned: 1

Very Likely Science (75)

pypi: ecobici

This is a python wrapper for the ecobici api
Papers that mentioned: 1

Very Likely Science (65)

pypi: ImageExtractor

ImageExtractor library is useful to help the user download any kind of Images at any date and time over the internet. These images will get downloaded as a job and then let user know that the images have been downloaded.
Papers that mentioned: 1

Very Likely Science (65)

cran: jetpack

A Friendly Package Manager
Papers that mentioned: 1

Very Likely Science (75)

cran: tweenr

Interpolate Data for Smooth Animations
Papers that mentioned: 1

Very Likely Science (70)

cran: ocedata

Oceanographic Data Sets for 'oce' Package
Papers that mentioned: 1

Very Likely Science (95)

pypi: repr

A shortcut to generate __repr__ methods for python classes
Papers that mentioned: 1

Very Likely Science (65)

pypi: fruitfly

Modular event-driven framework.
Papers that mentioned: 1

Very Likely Science (65)

cran: TwoStepCLogit

Conditional Logistic Regression: A Two-Step Estimation Method
Papers that mentioned: 1

Very Likely Science (85)

pypi: opam

Python Library for opam
Papers that mentioned: 1

Very Likely Science (65)

cran: kappalab

Non-Additive Measure and Integral Manipulation Functions
Papers that mentioned: 1

Very Likely Science (75)

cran: kaps

K-Adaptive Partitioning for Survival data
Papers that mentioned: 1

Very Likely Science (75)

cran: KHQ

Methods for Calculating 'KHQ' Scores and 'KHQ5D' Utility Index Scores
Papers that mentioned: 1

Very Likely Science (83)

pypi: meld

MELD
Papers that mentioned: 1

Very Likely Science (100)

cran: klexdatr

Kootenay Lake Exploitation Study Data
Papers that mentioned: 1

Very Likely Science (90)

cran: odin

ODE Generation and Integration
Papers that mentioned: 1

Very Likely Science (100)

pypi: opcsim

OPCSIM: simulating low-cost optical particle counters
Papers that mentioned: 1

Very Likely Science (100)

bioconductor: MSstatsQC

Longitudinal system suitability monitoring and quality control for proteomic experiments
Papers that mentioned: 1

Very Likely Science (100)

cran: KPC

Kernel Partial Correlation Coefficient
Papers that mentioned: 1

Very Likely Science (93)

cran: rKIN

(Kernel) Isotope Niche Estimation
Papers that mentioned: 1

Very Likely Science (100)

cran: rknn

Random KNN Classification and Regression
Papers that mentioned: 1

Very Likely Science (85)

pypi: epuck

Controlling e-puck robot
Papers that mentioned: 1

Very Likely Science (80)

cran: omicwas

Cell-Type-Specific Association Testing in Bulk Omics Experiments
Papers that mentioned: 1

Very Likely Science (95)

cran: KRIS

Keen and Reliable Interface Subroutines for Bioinformatic Analysis
Papers that mentioned: 1

Very Likely Science (87)

cran: rKOMICS

Minicircle Sequence Classes (MSC) Analyses
Papers that mentioned: 1

Very Likely Science (75)