Packages with Software Mentions in Scientific Papers

This is an opinionated gamedev library that is developed within the Software- and Game Development lecture at Stuttgart Media University.
Papers that mentioned: 1

Likely Science (40)

pypi: gr

Python visualization framework
Papers that mentioned: 1

Very Likely Science (90)

pypi: geck

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: dmipy

dmipy: diffusion microstructure imaging in python
Papers that mentioned: 1

Very Likely Science (90)

pypi: ct2vl

Converting SARS-CoV-2 PCR test Ct values to viral loads
Papers that mentioned: 1

Very Likely Science (65)

pypi: ele

A lightweight package with the periodic table of the elements
Papers that mentioned: 1

Very Likely Science (85)

pypi: dmp

Repackaging of Google's Diff Match and Patch libraries. Offers robust algorithms to perform the operations required for synchronizing plain text.
Papers that mentioned: 1

Likely Science (50)

pypi: geemap

A Python package for interactive mapping using Google Earth Engine and ipyleaflet
Papers that mentioned: 1

Very Likely Science (100)

pypi: gencove

Gencove API and CLI tool
Papers that mentioned: 1

Very Likely Science (65)

cran: rocc

ROC Based Classification
Papers that mentioned: 1

Very Likely Science (75)

pypi: genomictools

Tools for processing genomic ranges
Papers that mentioned: 1

Very Likely Science (65)

pypi: dnachisel

Optimize DNA sequences under constraints.
Papers that mentioned: 1

Very Likely Science (86)

pypi: dnaio

Read and write FASTA and FASTQ files efficiently
Papers that mentioned: 1

Very Likely Science (90)

pypi: GPViz

A Python package for Gaussian process visualisation.
Papers that mentioned: 1

Very Likely Science (90)

bioconductor: cola

A Framework for Consensus Partitioning
Papers that mentioned: 1

Very Likely Science (92)

pypi: mvtest

['GWAS analysis']
Papers that mentioned: 1

Very Likely Science (100)

pypi: EmulsiPred

A package to predict emulsifying potential of peptides
Papers that mentioned: 1

Very Likely Science (95)

cran: RsqMed

Total Mediation Effect Size Measure (R-Squared Measure) under Moderate or High-Dimensional Mediator Settings
Papers that mentioned: 1

Very Likely Science (83)

cran: sAIC

Akaike Information Criterion for Sparse Estimation
Papers that mentioned: 1

Very Likely Science (83)

pypi: docere

Tools for publishing analyses as a static site
Papers that mentioned: 1

Very Likely Science (65)

cran: rts

Raster Time Series Analysis
Papers that mentioned: 1

Very Likely Science (85)

pypi: css

a small, fast css parser for python the utilizes the codetalker library
Papers that mentioned: 1

Very Likely Science (65)

pypi: cshell

A command line tool to transfer transfer a webshell into a reverse shell, execute command directly into the webshell, genrating payload
Papers that mentioned: 1

Very Likely Science (85)

cran: rwt

'Rice Wavelet Toolbox' Wrapper
Papers that mentioned: 1

Very Likely Science (75)

Fuzzy the current location to pull all the submodules and specify the project if required. To launch, close and execute container with docker-compose and its relative services without change the directory.
Papers that mentioned: 1

Likely Science (40)

pypi: gpath

An abstraction of basic path operations between IronPython and CPython libraries. Does not use python standard libraries with IronPython.
Papers that mentioned: 1

Very Likely Science (65)

pypi: gpflow

Gaussian process methods in TensorFlow
Papers that mentioned: 1

Very Likely Science (80)

pypi: haversine

Calculate the distance between 2 points on Earth.
Papers that mentioned: 1

Very Likely Science (100)

pypi: docrep

Python package for docstring repetition
Papers that mentioned: 1

Very Likely Science (65)

pypi: Gnosis

Parses XML into Python object representation
Papers that mentioned: 1

Very Likely Science (65)

pypi: gpio

gpio access via the standard linux sysfs interface
Papers that mentioned: 1

Very Likely Science (65)

pypi: GPU-BSM

A GPU-based Tool to Map Bisulfite-Threated Reads
Papers that mentioned: 1

Likely Science (55)

pypi: doctor

This module uses python 3 type hints to validate request and response data in Flask Python APIs and generate API documentation.
Papers that mentioned: 1

Very Likely Science (65)

pypi: synthesizer

A simple virtual analog synthesizer.
Papers that mentioned: 1

Very Likely Science (65)

pypi: Graphy

A simple chart library for Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: Kohlrabi

An asyncio-based task queue.
Papers that mentioned: 1

Very Likely Science (65)

cran: FactoClass

Combination of Factorial Methods and Cluster Analysis
Papers that mentioned: 1

Very Likely Science (93)

pypi: group-lasso

Fast group lasso regularised linear models in a sklearn-style API.
Papers that mentioned: 1

Very Likely Science (75)

pypi: gw

Papers that mentioned: 1

Very Likely Science (65)

pypi: handler

A simple printer of nested list
Papers that mentioned: 1

Very Likely Science (65)

pypi: Gx

A Scavenger `s code in his whole life
Papers that mentioned: 1

Very Likely Science (65)

pypi: Domo

Domo is a web crawler & archiver
Papers that mentioned: 1

Very Likely Science (65)

cran: ezknitr

Avoid the Typical Working Directory Pain When Using 'knitr'
Papers that mentioned: 1

Very Likely Science (99)

pypi: donut

Makes symlinks to dotfiles.
Papers that mentioned: 1

Very Likely Science (75)

pypi: hnget

Shows and opens links on Hacker news from the terminal
Papers that mentioned: 1

Very Likely Science (65)

pypi: Hockey

Hockey Stats
Papers that mentioned: 1

Very Likely Science (65)

pypi: mykrobe

.
Papers that mentioned: 1

Very Likely Science (100)

pypi: doppel

A friendly file copier/installer
Papers that mentioned: 1

Very Likely Science (65)

cran: eyeTrackR

Organising and Analysing Eye-Tracking Data
Papers that mentioned: 1

Likely Science (58)

pypi: doppler

A raw SQL migration toolfor managing your database without an ORM.
Papers that mentioned: 1

Very Likely Science (65)

pypi: csf

Python module to get stock data from chinascope
Papers that mentioned: 1

Very Likely Science (65)

pypi: MyMail

A small example package By Rahul Pandey
Papers that mentioned: 1

Very Likely Science (65)

cran: sizeMat

Estimate Size at Sexual Maturity
Papers that mentioned: 1

Very Likely Science (75)

pypi: emvis

Visualization tools for EM data analysis
Papers that mentioned: 1

Very Likely Science (75)

cran: SCVA

Single-Case Visual Analysis
Papers that mentioned: 1

Very Likely Science (85)

pypi: csdmpy

A python module for the core scientific dataset model.
Papers that mentioned: 1

Very Likely Science (100)

cran: evdbayes

Bayesian Analysis in Extreme Value Theory
Papers that mentioned: 1

Very Likely Science (85)

cran: ShapeChange

Change-Point Estimation using Shape-Restricted Splines
Papers that mentioned: 1

Very Likely Science (83)

pypi: dos2unix

convert dos linefeeds (crlf) to unix (lf)
Papers that mentioned: 1

Very Likely Science (65)

cran: eurostat

Tools for Eurostat Open Data
Papers that mentioned: 1

Very Likely Science (100)

cran: simFrame

Simulation Framework
Papers that mentioned: 1

Very Likely Science (85)

pypi: mysearch

MySearch engine
Papers that mentioned: 1

Very Likely Science (65)

pypi: Hubbub

Papers that mentioned: 1

Very Likely Science (65)

pypi: dota2

Module for interacting Dota2's Game Coordinator
Papers that mentioned: 1

Likely Science (40)

pypi: crytic-compile

Util to facilitate smart contracts compilation.
Papers that mentioned: 1

Very Likely Science (65)

pypi: iconv

iconv-based Unicode converter
Papers that mentioned: 1

Very Likely Science (65)

pypi: iCR

This is a Python module to easily use the F5 iControl REST interface
Papers that mentioned: 1

Very Likely Science (65)

pypi: eppy

Scripting language for E+ idf files, and E+ output files
Papers that mentioned: 1

Very Likely Science (100)

pypi: dotenv

Handle .env files
Papers that mentioned: 1

Very Likely Science (65)

pypi: igdiscover

Analyze antibody repertoires and discover new V genes
Papers that mentioned: 1

Very Likely Science (80)

pypi: dotnet

Python Interoperability with the Microsoft .NET Framework
Papers that mentioned: 1

Likely Science (40)

cran: SkewHyperbolic

The Skew Hyperbolic Student t-Distribution
Papers that mentioned: 1

Very Likely Science (83)

pypi: crystal-torture

A Crystal Tortuosity Module
Papers that mentioned: 1

Very Likely Science (100)

pypi: eland

Python Client and Toolkit for DataFrames, Big Data, Machine Learning and ETL in Elasticsearch
Papers that mentioned: 1

Very Likely Science (90)

pypi: down

A CLI tool to check if a site or a list of sites are down or up
Papers that mentioned: 1

Very Likely Science (65)

pypi: heart

HEART (Health Relationship Trust) Python implementation.
Papers that mentioned: 1

Very Likely Science (65)

cran: SourceSet

A Graphical Model Approach to Identify Primary Genes in Perturbed Biological Pathways
Papers that mentioned: 1

Very Likely Science (85)

pypi: crystal

A realtime plotting library built using plot.ly
Papers that mentioned: 1

Very Likely Science (90)

pypi: mytools

Set of tools for photometric time series data and plotting
Papers that mentioned: 1

Very Likely Science (95)

pypi: imap

The integration of single-cell RNA-sequencing datasets from multiple sources is critical for deciphering cell-cell heterogeneities and interactions in complex biological systems. We present a novel unsupervised batch removal framework, called iMAP, based on two state-of-art deep generative models – autoencoders and generative adversarial networks.
Papers that mentioned: 1

Very Likely Science (90)