Packages with Software Mentions in Scientific Papers

A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learning.
Papers that mentioned: 1

Very Likely Science (90)

pypi: hard

hard variables: they dumping when the set time
Papers that mentioned: 1

Very Likely Science (65)

cran: RandomFieldsUtils

Utilities for the Simulation and Analysis of Random Fields and Genetic Data
Papers that mentioned: 1

Very Likely Science (93)

pypi: EyeTracker

Python Eye Tracking & Recording Software
Papers that mentioned: 1

Likely Science (55)

pypi: mut

Papers that mentioned: 1

Very Likely Science (65)

cran: rasterImage

An Improved Wrapper of image()
Papers that mentioned: 1

Very Likely Science (75)

cran: rbacon

Age-Depth Modelling using Bayesian Statistics
Papers that mentioned: 1

Very Likely Science (93)

pypi: discsim

Efficient coalescent simulation in continuous space
Papers that mentioned: 1

Very Likely Science (90)

pypi: pandapower

An easy to use open source tool for power system modeling, analysis and optimization with a high degree of automation.
Papers that mentioned: 1

Very Likely Science (90)

pypi: discuss

Papers that mentioned: 1

Very Likely Science (65)

pypi: fanc

Framework for the ANalysis of C-data.
Papers that mentioned: 1

Very Likely Science (75)

pypi: displayer

Batch display library for images in a directory
Papers that mentioned: 1

Very Likely Science (65)

cran: SimCorMultRes

Simulates Correlated Multinomial Responses
Papers that mentioned: 1

Very Likely Science (100)

cran: RegularizedSCA

Regularized Simultaneous Component Based Data Integration
Papers that mentioned: 1

Very Likely Science (75)

cran: registr

Curve Registration for Exponential Family Functional Data
Papers that mentioned: 1

Very Likely Science (83)

pypi: distl

Simple Distributions: math operations, serializing, covariances
Papers that mentioned: 1

Very Likely Science (90)

pypi: fbs

Create cross-platform desktop applications with Python and Qt
Papers that mentioned: 1

Very Likely Science (65)

cran: resample

Resampling Functions
Papers that mentioned: 1

Very Likely Science (75)

pypi: mutation

test mutations for pytest.
Papers that mentioned: 1

Very Likely Science (65)

pypi: harmonypy

A data integration algorithm.
Papers that mentioned: 1

Very Likely Science (100)

pypi: FileIO

This package contains File IO functions
Papers that mentioned: 1

Very Likely Science (65)

pypi: fma

Full Mongo Alchemyst
Papers that mentioned: 1

Very Likely Science (65)

pypi: mux

Simplifying how researchers access Data. It includes a CLI and a library.
Papers that mentioned: 1

Very Likely Science (75)

pypi: fnyzer

Flexible Nets analYZER
Papers that mentioned: 1

Very Likely Science (65)

pypi: empirical

Emperical Method of Fundamental Solutions solver for Python.
Papers that mentioned: 1

Very Likely Science (80)

cran: RIFS

Random Iterated Function System
Papers that mentioned: 1

Very Likely Science (75)

pypi: SDDetector

lightweight video detection
Papers that mentioned: 1

Very Likely Science (65)

pypi: django-blastplus

A simple Django app to conduct web-based blast+ local alignment search.
Papers that mentioned: 1

Very Likely Science (80)

pypi: edtools

Collection of tools for automated processing and clustering of electron diffraction data.
Papers that mentioned: 1

Very Likely Science (100)

pypi: frac

Rational approximations to numbers
Papers that mentioned: 1

Very Likely Science (80)

pypi: django-mongo-auth

Django authentication based on an extensible MongoEngine user class.
Papers that mentioned: 1

Very Likely Science (65)

cran: RKEEL

Using 'KEEL' in R Code
Papers that mentioned: 1

Very Likely Science (75)

cran: RMallow

Fit Multi-Modal Mallows' Models to Ranking Data
Papers that mentioned: 1

Very Likely Science (75)

pypi: sde

A CLI tool to edit simple JSON and YAML data files
Papers that mentioned: 1

Very Likely Science (65)

pypi: mvl

A package which implements various systems of n valued logic.
Papers that mentioned: 1

Very Likely Science (85)

pypi: dlsym

Papers that mentioned: 1

Very Likely Science (75)

pypi: dmd

Basic tools to transform gmbinder-style markdown to gmbinder-style html
Papers that mentioned: 1

Very Likely Science (65)

pypi: gdlib

This is an opinionated gamedev library that is developed within the Software- and Game Development lecture at Stuttgart Media University.
Papers that mentioned: 1

Likely Science (40)

pypi: hashID

Software to identify the different types of hashes
Papers that mentioned: 1

Very Likely Science (65)

pypi: mvpa

Multi-voxel pattern analysis (MVPA) tool for fMRI data
Papers that mentioned: 1

Very Likely Science (90)

cran: rocc

ROC Based Classification
Papers that mentioned: 1

Very Likely Science (75)

pypi: geo

Papers that mentioned: 1

Very Likely Science (65)

pypi: GeoAlchemy

Using SQLAlchemy with Spatial Databases
Papers that mentioned: 1

Very Likely Science (80)

cran: rolldown

R Markdown Output Formats for Storytelling
Papers that mentioned: 1

Very Likely Science (75)

cran: RSentiment

Analyse Sentiment of English Sentences
Papers that mentioned: 1

Very Likely Science (75)

pypi: mvtest

['GWAS analysis']
Papers that mentioned: 1

Very Likely Science (100)

pypi: EmulsiPred

A package to predict emulsifying potential of peptides
Papers that mentioned: 1

Very Likely Science (95)

cran: RsqMed

Total Mediation Effect Size Measure (R-Squared Measure) under Moderate or High-Dimensional Mediator Settings
Papers that mentioned: 1

Very Likely Science (83)

cran: sAIC

Akaike Information Criterion for Sparse Estimation
Papers that mentioned: 1

Very Likely Science (83)

pypi: letters

A simple method to customize your programs to infinity!
Papers that mentioned: 1

Very Likely Science (65)

pypi: globetrotter

Approximate country and language name matching.
Papers that mentioned: 1

Very Likely Science (65)

pypi: gpio

gpio access via the standard linux sysfs interface
Papers that mentioned: 1

Very Likely Science (65)

pypi: GPU-BSM

A GPU-based Tool to Map Bisulfite-Threated Reads
Papers that mentioned: 1

Likely Science (55)

pypi: doctor

This module uses python 3 type hints to validate request and response data in Flask Python APIs and generate API documentation.
Papers that mentioned: 1

Very Likely Science (65)

pypi: synthesizer

A simple virtual analog synthesizer.
Papers that mentioned: 1

Very Likely Science (65)

pypi: Graphy

A simple chart library for Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: Kohlrabi

An asyncio-based task queue.
Papers that mentioned: 1

Very Likely Science (65)

pypi: group-lasso

Fast group lasso regularised linear models in a sklearn-style API.
Papers that mentioned: 1

Very Likely Science (75)

pypi: dog

dog is a simple wrapper for "docker run" to make it simple to call tools residing inside docker containers
Papers that mentioned: 1

Very Likely Science (65)

pypi: hbase

Hbase REST API client built using uplink
Papers that mentioned: 1

Very Likely Science (65)

pypi: gsmodutils

Utilities for the management and testing of genome scale models in a cross platform, open manner.
Papers that mentioned: 1

Very Likely Science (80)

pypi: gw

Papers that mentioned: 1

Very Likely Science (65)

pypi: handler

A simple printer of nested list
Papers that mentioned: 1

Very Likely Science (65)

pypi: Gx

A Scavenger `s code in his whole life
Papers that mentioned: 1

Very Likely Science (65)

pypi: Domo

Domo is a web crawler & archiver
Papers that mentioned: 1

Very Likely Science (65)

pypi: donut

Makes symlinks to dotfiles.
Papers that mentioned: 1

Very Likely Science (75)

pypi: hnget

Shows and opens links on Hacker news from the terminal
Papers that mentioned: 1

Very Likely Science (65)

pypi: Hockey

Hockey Stats
Papers that mentioned: 1

Very Likely Science (65)

pypi: mykrobe

.
Papers that mentioned: 1

Very Likely Science (100)

pypi: doppel

A friendly file copier/installer
Papers that mentioned: 1

Very Likely Science (65)

pypi: emvis

Visualization tools for EM data analysis
Papers that mentioned: 1

Very Likely Science (75)

cran: SCVA

Single-Case Visual Analysis
Papers that mentioned: 1

Very Likely Science (85)

pypi: dos2unix

convert dos linefeeds (crlf) to unix (lf)
Papers that mentioned: 1

Very Likely Science (65)

cran: simFrame

Simulation Framework
Papers that mentioned: 1

Very Likely Science (85)

cran: simest

Constrained Single Index Model Estimation
Papers that mentioned: 1

Very Likely Science (83)

cran: SimVitD

Simulation Tools for Planning Vitamin D Studies
Papers that mentioned: 1

Very Likely Science (85)

cran: siland

Spatial Influence of Landscape
Papers that mentioned: 1

Very Likely Science (75)

pypi: dotenv

Handle .env files
Papers that mentioned: 1

Very Likely Science (65)

pypi: igdiscover

Analyze antibody repertoires and discover new V genes
Papers that mentioned: 1

Very Likely Science (80)

pypi: mytools

Set of tools for photometric time series data and plotting
Papers that mentioned: 1

Very Likely Science (95)

The integration of single-cell RNA-sequencing datasets from multiple sources is critical for deciphering cell-cell heterogeneities and interactions in complex biological systems. We present a novel unsupervised batch removal framework, called iMAP, based on two state-of-art deep generative models – autoencoders and generative adversarial networks.
Papers that mentioned: 1

Very Likely Science (90)