Packages with Software Mentions in Scientific Papers

pypi: revelation

Make awesome reveal.js presentations with revelation
Papers that mentioned: 1

Very Likely Science (65)

pypi: poseidon

DigitalOcean API v2 with SSH integration
Papers that mentioned: 1

Very Likely Science (65)

pypi: positional

Library to enforce positional or key-word arguments (deprecated/unmaintained)
Papers that mentioned: 1

Very Likely Science (65)

pypi: snfpy

A Python toolbox for performing similarity network fusion (SNF)
Papers that mentioned: 1

Very Likely Science (100)

pypi: povme

POVME (Pocket VOlume MEasurer) is a Python package for extracting actionable information from ensembles of protein structures for use in drug design.
Papers that mentioned: 1

Very Likely Science (100)

pypi: pow

Command line text snippets, inspired by Zach Holman's **boom**.
Papers that mentioned: 1

Very Likely Science (65)

pypi: sniff

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: Umbra

Umbra is the main package of sIBL_GUI and sIBL_Reporter.
Papers that mentioned: 1

Very Likely Science (65)

pypi: dmd

Basic tools to transform gmbinder-style markdown to gmbinder-style html
Papers that mentioned: 1

Very Likely Science (65)

pypi: dlsym

Papers that mentioned: 1

Very Likely Science (75)

pypi: ppmc

Calculate Pearson Product Moment Correlation between two (or more) vectors.
Papers that mentioned: 1

Very Likely Science (90)

pypi: ppmd

A tool to convert from PowerPoint OOXML files to Markdown Presentations
Papers that mentioned: 1

Likely Science (40)

pypi: mvl

A package which implements various systems of n valued logic.
Papers that mentioned: 1

Very Likely Science (85)

pypi: resample

Resampling-based inference in Python
Papers that mentioned: 1

Very Likely Science (80)

pypi: umls-similarity

Estimate the similarity of medical concepts based on Unified Medical Language System (UMLS)
Papers that mentioned: 1

Very Likely Science (100)

pypi: preg

Python-customisable grep-like command-line searcher.
Papers that mentioned: 1

Very Likely Science (65)

pypi: snipit

snipit
Papers that mentioned: 1

Very Likely Science (85)

pypi: representation

Python client for the representation API
Papers that mentioned: 1

Very Likely Science (65)

pypi: primers

Create PCR primers with optimal lengths, tms, gc%s and free energies
Papers that mentioned: 1

Very Likely Science (95)

pypi: prin

simplePrint
Papers that mentioned: 1

Very Likely Science (65)

pypi: prince

Factor analysis in Python: PCA, CA, MCA, MFA, FAMD, GPA
Papers that mentioned: 1

Very Likely Science (75)

pypi: replicator

Generates new project structures from Jinja templates
Papers that mentioned: 1

Very Likely Science (65)

pypi: venture

Rofi / Wofi based project selector
Papers that mentioned: 1

Very Likely Science (65)

pypi: Renamer

rename files according to a ruleset
Papers that mentioned: 1

Very Likely Science (65)

pypi: umwelt

Configure your program via environment variables, validated by pydantic.
Papers that mentioned: 1

Very Likely Science (65)

pypi: rnaseqc

Multi-sample visualization of metrics from RNA-SeQC
Papers that mentioned: 1

Very Likely Science (90)

pypi: reducer

Process FITS files
Papers that mentioned: 1

Very Likely Science (80)

pypi: sobol

SOBOL quasi random number sequence generator
Papers that mentioned: 1

Very Likely Science (85)

pypi: recursive

Papers that mentioned: 1

Very Likely Science (65)

pypi: Propel

A package to deploy sites in virtualenv, run scripts, and deploy workers with supervisor
Papers that mentioned: 1

Very Likely Science (65)

pypi: Rect

A class for handling rectangle regions.
Papers that mentioned: 1

Very Likely Science (65)

pypi: pstat

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: psamm

PSAMM metabolic modeling tools
Papers that mentioned: 1

Very Likely Science (100)

pypi: psc

A cli credential/secret storage utility using EC2 SSM Parameter Store
Papers that mentioned: 1

Likely Science (40)

pypi: storage

Libraries to interact with Enterprise Storage Arrays, FC Switches and Servers.
Papers that mentioned: 1

Likely Science (40)

pypi: raq

RabbitMQ-based Job Queue for Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: ptitprince

A Python implementation of Rainclouds, originally on R, ggplot2. Written on top of seaborn.
Papers that mentioned: 1

Very Likely Science (90)

pypi: pstack

Tool to print python thread and greenlet stacks
Papers that mentioned: 1

Likely Science (40)

pypi: solc

placeholder
Papers that mentioned: 1

Very Likely Science (65)

pypi: ran2

Implements the ran2 function from FORTRAN Numerical Recipes
Papers that mentioned: 1

Very Likely Science (90)

pypi: PsyLab

PsyLab: Psychophysics Lab
Papers that mentioned: 1

Very Likely Science (100)

pypi: pt

Papers that mentioned: 1

Very Likely Science (65)

pypi: unassigner

Bacterial species unassigner
Papers that mentioned: 1

Very Likely Science (80)

pypi: ptemcee

Parallel-tempered emcee.
Papers that mentioned: 1

Very Likely Science (86)

pypi: pter

Console UI to manage your todo.txt file(s).
Papers that mentioned: 1

Likely Science (40)

pypi: quantum

Quantum (virtual network service)
Papers that mentioned: 1

Very Likely Science (75)

pypi: pulse2percept

A Python-based simulation framework for bionic vision
Papers that mentioned: 1

Very Likely Science (100)

pypi: qm

Quine-McCluskey two-level logic minimization method.
Papers that mentioned: 1

Very Likely Science (80)

pypi: seplot

A front-end for Python PyX
Papers that mentioned: 1

Very Likely Science (85)

pypi: pxrd

PC-Axis PX file reader
Papers that mentioned: 1

Very Likely Science (65)

pypi: qam

QAM is a simple RPC Framework which uses the AMQP Protocol as Transport Protocol.
Papers that mentioned: 1

Very Likely Science (65)

cran: rlecuyer

R Interface to RNG with Multiple Streams
Papers that mentioned: 1

Very Likely Science (83)

pypi: pyAFQ

pyAFQ: Automated Fiber Quantification ... in Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyxform

A Python package to create XForms for ODK Collect.
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyDynamic

A software package for the analysis of dynamic measurements
Papers that mentioned: 1

Very Likely Science (100)

pypi: pybloomfiltermmap

A Bloom filter (bloomfilter) for Python built on mmap
Papers that mentioned: 1

Very Likely Science (85)

pypi: PyBluez

Bluetooth Python extension module
Papers that mentioned: 1

Very Likely Science (65)

pypi: sound

Fast, out-of-core access to disk-based sound data and read/write audio files.
Papers that mentioned: 1

Very Likely Science (80)

pypi: pybromo

Simulator for confocal single-molecule fluorescence experiments.
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyCGM2

Conventional Gait models and Gait analysis
Papers that mentioned: 1

Very Likely Science (95)

pypi: PyChess

A simple chess game adjudicator
Papers that mentioned: 1

Likely Science (40)

pypi: zcalc

A fun RPN calculator
Papers that mentioned: 1

Very Likely Science (65)

pypi: ZEdit

A simple 3-D rendering engine and editor
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyconcepticon

programmatic curation of concepticon-data
Papers that mentioned: 1

Very Likely Science (90)

pypi: pytesmo

Python Toolbox for the evaluation of soil moisture observations
Papers that mentioned: 1

Very Likely Science (65)

pypi: pysurfer

PySurfer: cortical surface visualization using Python.
Papers that mentioned: 1

Very Likely Science (90)

pypi: PyFFI

Processing block structured binary files.
Papers that mentioned: 1

Very Likely Science (100)

pypi: pysda

A suite for diffusion analysis algorithms.
Papers that mentioned: 1

Very Likely Science (90)

pypi: pydensecrf

A python interface to Philipp Krähenbühl's fully-connected (dense) CRF code.
Papers that mentioned: 1

Very Likely Science (100)

pypi: utest

utest is a tiny unit testing library for Python.
Papers that mentioned: 1

Very Likely Science (65)

pypi: spack

A module for analyzing packings of 2D and 3D spheres
Papers that mentioned: 1

Very Likely Science (80)

pypi: spade

Smart Python Agent Development Environment
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyelectro

A Python library for analysis of electrophysiological data
Papers that mentioned: 1

Very Likely Science (90)

pypi: sepia

Static file generator.
Papers that mentioned: 1

Very Likely Science (65)

pypi: spanner

An accumulation of utilities / convenience functions for python
Papers that mentioned: 1

Very Likely Science (65)

pypi: sparkhpc

spark deployment on hpc resources made easy
Papers that mentioned: 1

Very Likely Science (65)

pypi: PyGEP

Gene Expression Programming for Python
Papers that mentioned: 1

Very Likely Science (90)

pypi: UTide

Python distribution of the MatLab package UTide
Papers that mentioned: 1

Very Likely Science (100)

pypi: pygexf

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: Unchained

Some helper functions for sharing between Django projects
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyHarmonySearch

pyHarmonySearch is a pure Python implementation of the harmony search (HS) global optimization algorithm.
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyhrv

Python toolbox for Heart Rate Variability.
Papers that mentioned: 1

Likely Science (55)

pypi: veranda

veranda is a place for IO related classes and operations dealing with multi-dimensional vector and raster data.
Papers that mentioned: 1

Very Likely Science (100)

pypi: unet

PyTorch implementation of 2D and 3D U-Net
Papers that mentioned: 1

Very Likely Science (100)

pypi: pySAXS

Python for Small Angle X-ray Scattering data treatment
Papers that mentioned: 1

Very Likely Science (65)

pypi: SpatialKappa

Implementation of syntactic extension of Kappa to allow expression of location and transport in models
Papers that mentioned: 1

Very Likely Science (100)

pypi: pyramid

The Pyramid Web Framework, a Pylons project
Papers that mentioned: 1

Very Likely Science (65)

pypi: spc

Statistical Process Control library for monitoring process behaviour
Papers that mentioned: 1

Very Likely Science (90)

pypi: pyParticleEst

Framework for particle based estimation methods, such as particle filtering and smoothing
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyMCR

Multivariate Curve Resolution in Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: pymzml

high-throughput mzML parsing
Papers that mentioned: 1

Likely Science (55)

pypi: pymunk

Pymunk is a easy-to-use pythonic 2d physics library
Papers that mentioned: 1

Very Likely Science (90)

pypi: Fangorn

Nested Sets SQL Tree for Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyms

PyMS - A Metastock tool for Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: pyModeS

Python Mode-S and ADS-B Decoder
Papers that mentioned: 1

Very Likely Science (65)

pypi: stress

A trivial utility for consuming system resources.
Papers that mentioned: 1

Likely Science (40)

pypi: pyonmttok

Fast and customizable text tokenization library with BPE and SentencePiece support
Papers that mentioned: 1

Very Likely Science (95)

pypi: pyo

Python module to build digital signal processing program.
Papers that mentioned: 1

Likely Science (55)

pypi: PyODE

Python wrapper for the Open Dynamics Engine
Papers that mentioned: 1

Very Likely Science (80)

pypi: pymca

pymca
Papers that mentioned: 1

Very Likely Science (80)