cran: flexCWM
Flexible Cluster-Weighted Modeling
Papers that mentioned: 1
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cran: swa
Subsampling Winner Algorithm for Classification
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cran: swirl
Learn R, in R
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bioconductor: sRACIPE
Systems biology tool to simulate gene regulatory circuits
Papers that mentioned: 1
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pypi: ConSequences
Suite to delineate contiguous and conserved sequences from assemblies and search for their presence in raw sequencing data.
Papers that mentioned: 1
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bioconductor: sscu
Strength of Selected Codon Usage
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pypi: mOTUlizer
making OTUs from genomes, and stats on them. and even core-genomes
Papers that mentioned: 1
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pypi: glycowork
Package for processing and analyzing glycans
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cran: flora
Tools for Interacting with the Brazilian Flora 2020
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pypi: scikit-network
Graph algorithms
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cran: fMultivar
Rmetrics - Modeling of Multivariate Financial Return Distributions
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cran: focusedMDS
Focused, Interactive Multidimensional Scaling
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pypi: mak
A simple maximum finder
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bioconductor: Streamer
Enabling stream processing of large files
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cran: fortunes
R Fortunes
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pypi: constraints
Returns a constrained subset of the members of a dict of dicts
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cran: fsbrain
Managing and Visualizing Brain Surface Data
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pypi: ContactVis
Contact map plotting for predicted protein residue-residue contacts.
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pypi: Glymur
Python interface to OpenJPEG library for reading and writing JPEG 2000 images.
Papers that mentioned: 1
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cran: fsr
Handling Fuzzy Spatial Data
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pypi: inchworm
A small Python module for progress bars in IPython
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cran: funLBM
Model-Based Co-Clustering of Functional Data
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cran: fuzzyforest
Fuzzy Forests
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pypi: movement
Analysis of body movement
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pypi: movie
movie package
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cran: TELP
Social Representation Theory Application: The Free Evocation of Words Technique
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pypi: sqwrl
Sqlachemy Query WRapper Library - pandas-like SQL
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pypi: context-explorer
Context aware analysis of cell fate acquisitions
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cran: GauPro
Gaussian Process Fitting
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pypi: contra
High-performance containers with a Python interface
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cran: gatepoints
Easily Gate or Select Points on a Scatter Plot
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pypi: mpa
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pypi: MPBS
zmq based MultiPublisher-Broker-multiSubscriber framework
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cran: gbs2ploidy
Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data
Papers that mentioned: 1
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pypi: mpc
A fast and differentiable MPC solver for PyTorch.
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cran: GCPM
Generalized Credit Portfolio Model
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cran: gen3sis
General Engine for Eco-Evolutionary Simulations
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bioconductor: timeOmics
Time-Course Multi-Omics data integration
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cran: geneSignatureFinder
A Gene-signatures finder tools
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pypi: mpes
Distributed data processing routines for multidimensional photoemission spectroscopy (MPES)
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cran: GeNetIt
Spatial Graph-Theoretic Genetic Gravity Modelling
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cran: geno2proteo
Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci
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pypi: scikit-spectra
Spectroscopy in Python built on Pandas.
Papers that mentioned: 1
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cran: GenOrd
Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions
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cran: geodata
Download Geographic Data
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pypi: contrastive
Python library for performing unsupervised learning (e.g. PCA) in contrastive settings, where one is interested in finding directions and patterns that exist one dataset, but not the other
Papers that mentioned: 1
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cran: SALES
The (Adaptive) Elastic Net and Lasso Penalized Sparse Asymmetric Least Squares (SALES) and Coupled Sparse Asymmetric Least Squares (COSALES) using Coordinate Descent and Proximal Gradient Algorithms
Papers that mentioned: 1
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cran: geojsonR
A GeoJson Processing Toolkit
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cran: lmom
L-Moments
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cran: CopulaREMADA
Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies
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cran: geospt
Geostatistical Analysis and Design of Optimal Spatial Sampling Networks
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cran: lobstr
Visualize R Data Structures with Trees
Papers that mentioned: 1
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cran: localgauss
Estimating Local Gaussian Parameters
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cran: ggdist
Visualizations of Distributions and Uncertainty
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cran: ggheatmap
Plot Heatmap
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pypi: MPInterfaces
High throughput analysis of interfaces using VASP and Materials Project tools
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pypi: scikit-surgerycore
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pypi: mplleaflet
Convert Matplotlib plots into Leaflet web maps
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pypi: mpm
package (skill) manager for Misty
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cran: TopKLists
Inference, Aggregation and Visualization for Top-K Ranked Lists
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cran: gggap
Streamlined Creation of Segments on the Y-Axis of 'ggplot2' Plots
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cran: TPES
Tumor Purity Estimation using SNVs
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cran: gggibbous
Moon Charts, a Pie Chart Alternative
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pypi: mpop
Meteorological post processing package
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bioconductor: chopsticks
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cran: longitudinal
Analysis of Multiple Time Course Data
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pypi: tak
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cran: ggiraph
Make 'ggplot2' Graphics Interactive
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cran: treelet
An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and Unordered Data
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pypi: scikit-surgeryimage
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Papers that mentioned: 1
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cran: ggmix
Variable Selection in Linear Mixed Models for SNP Data
Papers that mentioned: 1
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cran: GGMridge
Gaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation
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cran: PoolTestR
Prevalence and Regression for Pool-Tested (Group-Tested) Data
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pypi: mps
Search, Stream and Download MP3
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pypi: Passbook
Passbook file generator
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bioconductor: TTMap
Two-Tier Mapper: a clustering tool based on topological data analysis
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pypi: mpt
Microstructure Protocol Toolbox
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pypi: maxflow
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bioconductor: dpeak
dPeak (Deconvolution of Peaks in ChIP-seq Analysis)
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pypi: coolpuppy
A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
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cran: LPWC
Lag Penalized Weighted Correlation for Time Series Clustering
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pypi: scikit-surgerynditracker
Interface for Northern Digital (NDI) Trackers with data to NumPy arrays
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pypi: mrbles
MRBLEs decoding and analysis package
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bioconductor: eisaR
Exon-Intron Split Analysis (EISA) in R
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pypi: gmr
Gaussian Mixture Regression
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bioconductor: epiNEM
epiNEM
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cran: triangulation
Determine Position of Observer
Papers that mentioned: 1
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bioconductor: VariantFiltering
Filtering of coding and non-coding genetic variants
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bioconductor: FastqCleaner
A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files
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bioconductor: fCCAC
functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets
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bioconductor: fcScan
fcScan for detecting clusters of coordinates with user defined options
Papers that mentioned: 1
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bioconductor: widgetTools
Creates an interactive tcltk widget
Papers that mentioned: 1
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cran: ggquickeda
Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables
Papers that mentioned: 1
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bioconductor: yamss
Tools for high-throughput metabolomics
Papers that mentioned: 1
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cran: RcppMeCab
'rcpp' Wrapper for 'mecab' Library
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pypi: scikit-surgeryspeech
Interface to speech services for image-guided surgery.
Papers that mentioned: 1
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cran: ggResidpanel
Panels and Interactive Versions of Diagnostic Plots using 'ggplot2'
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bioconductor: fishpond
Fishpond: downstream methods and tools for expression data
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bioconductor: FilterFFPE
FFPE Artificial Chimeric Read Filter for NGS data
Papers that mentioned: 1
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cran: ggseas
'stats' for Seasonal Adjustment on the Fly with 'ggplot2'
Papers that mentioned: 1
Very Likely Science (75)