Packages with Software Mentions in Scientific Papers

Identify runs of homozygosity (hapROH) and contamination (hapCon) in low coverage ancient human DNA data (1240K SNPs) using modern reference panel
Papers that mentioned: 1

Very Likely Science (100)

pypi: extra

Papers that mentioned: 1

Very Likely Science (65)

pypi: dirichlet

Calculates Dirichlet test and plots 2-simplex Dirichlets
Papers that mentioned: 1

Very Likely Science (80)

pypi: discord

A mirror package for discord.py. Please install that instead.
Papers that mentioned: 1

Very Likely Science (100)

pypi: ctorrent

Curses Torrent Browser
Papers that mentioned: 1

Very Likely Science (65)

cran: fdrci

Permutation-Based FDR Point and Confidence Interval Estimation
Papers that mentioned: 1

Very Likely Science (83)

pypi: ElecSus

(Atomic Physics) Calculate the weak-probe electric susceptibility for alkali-metal vapours
Papers that mentioned: 1

Very Likely Science (100)

pypi: discrete

Pure Python implementation of discrete random variables
Papers that mentioned: 1

Very Likely Science (80)

pypi: pkg

Python scripts dealing with software packages used in building applications and systems
Papers that mentioned: 1

Very Likely Science (65)

pypi: emphasis

Emphatic debug prints
Papers that mentioned: 1

Very Likely Science (65)

cran: RCALI

Calculation of the Integrated Flow of Particles Between Polygons
Papers that mentioned: 1

Very Likely Science (75)

pypi: ele

A lightweight package with the periodic table of the elements
Papers that mentioned: 1

Very Likely Science (85)

pypi: discsim

Efficient coalescent simulation in continuous space
Papers that mentioned: 1

Very Likely Science (90)

pypi: pandapower

An easy to use open source tool for power system modeling, analysis and optimization with a high degree of automation.
Papers that mentioned: 1

Very Likely Science (90)

pypi: discuss

Papers that mentioned: 1

Very Likely Science (65)

pypi: GPViz

A Python package for Gaussian process visualisation.
Papers that mentioned: 1

Very Likely Science (90)

pypi: fanc

Framework for the ANalysis of C-data.
Papers that mentioned: 1

Very Likely Science (75)

pypi: displayer

Batch display library for images in a directory
Papers that mentioned: 1

Very Likely Science (65)

cran: SimCorMultRes

Simulates Correlated Multinomial Responses
Papers that mentioned: 1

Very Likely Science (100)

cran: FactoClass

Combination of Factorial Methods and Cluster Analysis
Papers that mentioned: 1

Very Likely Science (93)

cran: RegularizedSCA

Regularized Simultaneous Component Based Data Integration
Papers that mentioned: 1

Very Likely Science (75)

cran: registr

Curve Registration for Exponential Family Functional Data
Papers that mentioned: 1

Very Likely Science (83)

cran: exampletestr

Help for Writing Unit Tests Based on Function Examples
Papers that mentioned: 1

Very Likely Science (75)

pypi: FastRoot

Papers that mentioned: 1

Very Likely Science (80)

pypi: csb

Computational Structural Biology Toolbox
Papers that mentioned: 1

Very Likely Science (90)

cran: evdbayes

Bayesian Analysis in Extreme Value Theory
Papers that mentioned: 1

Very Likely Science (85)

pypi: distl

Simple Distributions: math operations, serializing, covariances
Papers that mentioned: 1

Very Likely Science (90)

pypi: fbs

Create cross-platform desktop applications with Python and Qt
Papers that mentioned: 1

Very Likely Science (65)

cran: resample

Resampling Functions
Papers that mentioned: 1

Very Likely Science (75)

cran: eurostat

Tools for Eurostat Open Data
Papers that mentioned: 1

Very Likely Science (100)

pypi: tangle

Python framework with DI, AOP support
Papers that mentioned: 1

Very Likely Science (65)

pypi: gpustats

GPU-based statistical functions
Papers that mentioned: 1

Very Likely Science (100)

pypi: mutations

Encapsulate your business logic in command classes.
Papers that mentioned: 1

Likely Science (40)

pypi: fish

Animating fish (and birds) for progress bars
Papers that mentioned: 1

Very Likely Science (65)

pypi: fma

Full Mongo Alchemyst
Papers that mentioned: 1

Very Likely Science (65)

pypi: mux

Simplifying how researchers access Data. It includes a CLI and a library.
Papers that mentioned: 1

Very Likely Science (75)

pypi: fnyzer

Flexible Nets analYZER
Papers that mentioned: 1

Very Likely Science (65)

pypi: django-auth

Django auth app!
Papers that mentioned: 1

Very Likely Science (65)

pypi: harmony-pytorch

Pytorch implementation of Harmony algorithm on single-cell sequencing data integration
Papers that mentioned: 1

Very Likely Science (100)

cran: revgeo

Reverse Geocoding with the Photon Geocoder for OpenStreetMap, Google Maps, and Bing
Papers that mentioned: 1

Very Likely Science (75)

cran: rForest

Forest Inventory and Analysis
Papers that mentioned: 1

Very Likely Science (85)

pypi: Empty

Wrapper which makes Flask development easier
Papers that mentioned: 1

Very Likely Science (65)

pypi: freud

TUI REST client to analyze API endpoints
Papers that mentioned: 1

Very Likely Science (65)

pypi: ems

Small collection of classes to build model centric applications with python and Qt
Papers that mentioned: 1

Very Likely Science (65)

cran: Rlab

Functions and Datasets Required for ST370 Class
Papers that mentioned: 1

Very Likely Science (83)

pypi: Fangorn

Nested Sets SQL Tree for Python
Papers that mentioned: 1

Very Likely Science (65)

cran: rlecuyer

R Interface to RNG with Multiple Streams
Papers that mentioned: 1

Very Likely Science (83)

pypi: crytic-compile

Util to facilitate smart contracts compilation.
Papers that mentioned: 1

Very Likely Science (65)

pypi: mvl

A package which implements various systems of n valued logic.
Papers that mentioned: 1

Very Likely Science (85)

pypi: dlsym

Papers that mentioned: 1

Very Likely Science (75)

pypi: crystal-torture

A Crystal Tortuosity Module
Papers that mentioned: 1

Very Likely Science (100)

pypi: gar

gar brings context-specific tests to nose
Papers that mentioned: 1

Very Likely Science (65)

pypi: eland

Python Client and Toolkit for DataFrames, Big Data, Machine Learning and ETL in Elasticsearch
Papers that mentioned: 1

Very Likely Science (90)

pypi: galaxyxml

Galaxy XML generation library
Papers that mentioned: 1

Very Likely Science (65)

pypi: geck

UNKNOWN
Papers that mentioned: 1

Very Likely Science (65)

pypi: dmipy

dmipy: diffusion microstructure imaging in python
Papers that mentioned: 1

Very Likely Science (90)

pypi: dmp

Repackaging of Google's Diff Match and Patch libraries. Offers robust algorithms to perform the operations required for synchronizing plain text.
Papers that mentioned: 1

Likely Science (50)

pypi: geemap

A Python package for interactive mapping using Google Earth Engine and ipyleaflet
Papers that mentioned: 1

Very Likely Science (100)

pypi: crystal

A realtime plotting library built using plot.ly
Papers that mentioned: 1

Very Likely Science (90)

pypi: gpt

GPT utils
Papers that mentioned: 1

Very Likely Science (65)

pypi: hashID

Software to identify the different types of hashes
Papers that mentioned: 1

Very Likely Science (65)

pypi: mvpa

Multi-voxel pattern analysis (MVPA) tool for fMRI data
Papers that mentioned: 1

Very Likely Science (90)

pypi: Cryptsy

A python wrapper for the Cryptsy API.
Papers that mentioned: 1

Very Likely Science (65)

pypi: emtable

Simple module to deal with EM tabular data (aka metadata)
Papers that mentioned: 1

Very Likely Science (80)

pypi: MVPR

Multi-variable polynomial regression for curve fitting.
Papers that mentioned: 1

Very Likely Science (90)

cran: robcor

Robust Correlations
Papers that mentioned: 1

Very Likely Science (85)

pypi: genomictools

Tools for processing genomic ranges
Papers that mentioned: 1

Very Likely Science (65)

cran: enpls

Ensemble Partial Least Squares Regression
Papers that mentioned: 1

Very Likely Science (91)

pypi: geo

Papers that mentioned: 1

Very Likely Science (65)

pypi: GeoAlchemy

Using SQLAlchemy with Spatial Databases
Papers that mentioned: 1

Very Likely Science (80)

cran: rolldown

R Markdown Output Formats for Storytelling
Papers that mentioned: 1

Very Likely Science (75)

pypi: crypt4gh

GA4GH cryptographic utilities
Papers that mentioned: 1

Very Likely Science (100)

cran: RSentiment

Analyse Sentiment of English Sentences
Papers that mentioned: 1

Very Likely Science (75)

pypi: openx

A simple printer of nested lists
Papers that mentioned: 1

Very Likely Science (65)

pypi: ops

The Python library behind great charms
Papers that mentioned: 1

Very Likely Science (65)

bioconductor: bnbc

Bandwise normalization and batch correction of Hi-C data
Papers that mentioned: 1

Very Likely Science (100)

pypi: cruzdb

Interface to UCSC genomic databases. Also allows things like up/downstream/k-nearest-neighbor queries and mirroring of tables to local sqlite databases
Papers that mentioned: 1

Very Likely Science (100)

pypi: letters

A simple method to customize your programs to infinity!
Papers that mentioned: 1

Very Likely Science (65)

pypi: globetrotter

Approximate country and language name matching.
Papers that mentioned: 1

Very Likely Science (65)

cran: elect

Estimation of Life Expectancies Using Multi-State Models
Papers that mentioned: 1

Very Likely Science (83)

cran: rwt

'Rice Wavelet Toolbox' Wrapper
Papers that mentioned: 1

Very Likely Science (75)

pypi: gpio

gpio access via the standard linux sysfs interface
Papers that mentioned: 1

Very Likely Science (65)

pypi: GPU-BSM

A GPU-based Tool to Map Bisulfite-Threated Reads
Papers that mentioned: 1

Likely Science (55)

pypi: doctor

This module uses python 3 type hints to validate request and response data in Flask Python APIs and generate API documentation.
Papers that mentioned: 1

Very Likely Science (65)