Packages with Software Mentions in Scientific Papers

Register `cividis` with matplotlib, a color map optimized for color vision deficiency, as published in Nuñez, et al. (2018), PLoS ONE 13(7): e0199239 .
Papers that mentioned: 1

Very Likely Science (65)

pypi: frags

Finding recombinations in reads
Papers that mentioned: 1

Very Likely Science (80)

pypi: Lectio

A Lectio API, used for accessing lectio.dk
Papers that mentioned: 1

Very Likely Science (65)

pypi: er

Generate data that matches a given regular expression.
Papers that mentioned: 1

Very Likely Science (90)

pypi: C-Rank

Extracts Keyphrases from Documents
Papers that mentioned: 1

Likely Science (40)

pypi: laszip

Bindings for LASzip made with pybind11
Papers that mentioned: 1

Very Likely Science (65)

pypi: lgr

Papers that mentioned: 1

Very Likely Science (65)

pypi: Basket

A local static PyPI repository builder
Papers that mentioned: 1

Very Likely Science (65)

pypi: ssl

SSL wrapper for socket objects (2.3, 2.4, 2.5 compatible)
Papers that mentioned: 1

Very Likely Science (65)

cran: rsf

Report of Statistical Findings in 'bookdown'
Papers that mentioned: 1

Very Likely Science (85)

pypi: milc

Opinionated Batteries-Included Python 3 CLI Framework.
Papers that mentioned: 1

Very Likely Science (80)

cran: peRiodiCS

Functions for Generating Periodic Curves
Papers that mentioned: 1

Very Likely Science (75)

pypi: aText

Analysis of Text (aText)
Papers that mentioned: 1

Very Likely Science (75)

pypi: fread

A python package to change from Interaction console based code to file based code
Papers that mentioned: 1

Very Likely Science (65)

pypi: gap-stat

Python implementation of the gap statistic with optional Rust optimizations.
Papers that mentioned: 1

Very Likely Science (100)

pypi: CladeCompare

Test for sites of contrasting conservation between gene clades.
Papers that mentioned: 1

Very Likely Science (100)

cran: mumm

Multiplicative Mixed Models using the Template Model Builder
Papers that mentioned: 1

Very Likely Science (75)

pypi: lane

Papers that mentioned: 1

Unlikely Science (0)

pypi: marathon

Marathon Client Library
Papers that mentioned: 1

Very Likely Science (65)

cran: DySeq

Functions for Dyadic Sequence Analyses
Papers that mentioned: 1

Very Likely Science (75)

pypi: gappy

Python framework for Gap Service API
Papers that mentioned: 1

Very Likely Science (65)

pypi: markers

A data labeling widget for use with Markers.ai
Papers that mentioned: 1

Very Likely Science (80)

pypi: arithmetic

Arithmetic module
Papers that mentioned: 1

Very Likely Science (65)

pypi: transmap

API for Transmap Hub
Papers that mentioned: 1

Very Likely Science (65)

pypi: frog

Improved and extended turtle graphics like module
Papers that mentioned: 1

Very Likely Science (90)

cran: RJDBC

Provides Access to Databases Through the JDBC Interface
Papers that mentioned: 1

Likely Science (50)

pypi: argweaver

Ancestral recombination graph sampling method
Papers that mentioned: 1

Very Likely Science (65)

pypi: mindsponge

A Python Based AI Molecular Mechanics Simulation Tool
Papers that mentioned: 1

Very Likely Science (75)

pypi: mapdamage

Papers that mentioned: 1

Unlikely Science (0)

pypi: marten

Stupid simple Python configuration environments
Papers that mentioned: 1

Very Likely Science (65)

cran: Zseq

Integer Sequence Generator
Papers that mentioned: 1

Very Likely Science (75)

pypi: edtech

Tool project from educational technology group
Papers that mentioned: 1

Very Likely Science (65)

pypi: Millet

A simple framework for building complex dialogue systems.
Papers that mentioned: 1

Very Likely Science (65)

pypi: kontroller

Python lib for kubernetes controllers
Papers that mentioned: 1

Very Likely Science (65)

pypi: AQoPA

Automated Quality of Protection Analysis Tool for QoP-ML models.
Papers that mentioned: 1

Very Likely Science (90)

pypi: httpcode

httpcode - explain HTTP status code
Papers that mentioned: 1

Very Likely Science (65)

cran: multiselect

Selecting Combinations of Predictors by Leveraging Multiple AUCs for an Ordered Multilevel Outcome
Papers that mentioned: 1

Very Likely Science (75)

pypi: cpa

full life cycle management for python apps and libs
Papers that mentioned: 1

Very Likely Science (65)

cran: Rlof

R Parallel Implementation of Local Outlier Factor(LOF)
Papers that mentioned: 1

Very Likely Science (75)

pypi: minfo

Python-based mutual information estimator, designed for multiple data types.
Papers that mentioned: 1

Very Likely Science (71)

pypi: Galaxy-ML

Galaxy Machine Learning Library
Papers that mentioned: 1

Very Likely Science (100)

pypi: trackC

Track view of chromosome conformation and multi-omics data
Papers that mentioned: 1

Likely Science (40)

pypi: gala

Galactic dynamics in Python
Papers that mentioned: 1

Very Likely Science (100)

cran: ms.sev

Package for Calculation of ARMSS, Local MSSS and Global MSSS
Papers that mentioned: 1

Very Likely Science (75)

cran: TEQR

Target Equivalence Range Design
Papers that mentioned: 1

Very Likely Science (75)

cran: Ternary

Create Ternary and Holdridge Plots
Papers that mentioned: 1

Very Likely Science (100)

pypi: MiniML

MiniML - a minimal machine learning API based on Apache MADlib and PostgreSQL
Papers that mentioned: 1

Very Likely Science (90)

cran: textreuse

Detect Text Reuse and Document Similarity
Papers that mentioned: 1

Very Likely Science (95)

cran: dataMaid

A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process
Papers that mentioned: 1

Very Likely Science (100)

pypi: GaitAnalysisToolKit

Various tools for gait analysis used at the Cleveland State University Human Motion and Control Lab.
Papers that mentioned: 1

Very Likely Science (100)

pypi: arachnid

Single Particle Data Analysis Suite
Papers that mentioned: 1

Very Likely Science (90)

pypi: edt

Multi-Label Anisotropic Euclidean Distance Transform 3D
Papers that mentioned: 1

Very Likely Science (100)

cran: TestCor

FWER and FDR Controlling Procedures for Multiple Correlation Tests
Papers that mentioned: 1

Very Likely Science (85)

cran: tgram

Compute and Plot Tracheidograms
Papers that mentioned: 1

Very Likely Science (75)

cran: modMax

Community Structure Detection via Modularity Maximization
Papers that mentioned: 1

Very Likely Science (75)

pypi: kodak

HTTP server for uploading images and generating thumbnails
Papers that mentioned: 1

Very Likely Science (80)

pypi: metabasic

Dead simple client for interacting with the Metabase dataset API
Papers that mentioned: 1

Very Likely Science (65)

pypi: htsint

API and database for high-throughput sequencing analyses.
Papers that mentioned: 1

Very Likely Science (65)

pypi: optima

PyTorch Optimization Framework for Researchers
Papers that mentioned: 1

Very Likely Science (75)

pypi: brian2modelfitting

Modelfitting Toolbox for the Brian 2 simulator
Papers that mentioned: 1

Very Likely Science (90)

pypi: fubar

PBKDF2-AES-CTR-HMAC-SHA256-RSA-PKCS#1-OAEP-PSS-bencode wrapper
Papers that mentioned: 1

Very Likely Science (65)

pypi: misic

Microbe segmentation in dense colonies
Papers that mentioned: 1

Very Likely Science (65)

pypi: kgd

Tool for retrieving information on tax payments by Kazakhstan companies
Papers that mentioned: 1

Likely Science (40)

pypi: kornia

Open Source Differentiable Computer Vision Library for PyTorch
Papers that mentioned: 1

Very Likely Science (100)

pypi: JAEN

JAEN
Papers that mentioned: 1

Very Likely Science (65)

pypi: ribosome

neovim plugin framework
Papers that mentioned: 1

Very Likely Science (65)

pypi: correlate

Correlates two sets of data by matching
Papers that mentioned: 1

Very Likely Science (65)

pypi: mirror

Mirror for open source mirror site to sync files
Papers that mentioned: 1

Very Likely Science (65)

pypi: traffic

A toolbox for manipulating and analysing air traffic data
Papers that mentioned: 1

Very Likely Science (100)

pypi: fuchsia

Fuchsia reduces differential equations for Feynman master integrals to canonical form
Papers that mentioned: 1

Very Likely Science (90)

pypi: TranscriptSim

Package for Coaching Session Transcripts Similarity Calculations
Papers that mentioned: 1

Very Likely Science (65)

cran: biscale

Tools and Palettes for Bivariate Thematic Mapping
Papers that mentioned: 1

Very Likely Science (100)

pypi: mk

mk
Papers that mentioned: 1

Very Likely Science (65)

pypi: MNSD

Papers that mentioned: 1

Very Likely Science (65)

pypi: mixer

Mixer -- Is a fixtures replacement. Supported Django ORM, SqlAlchemy ORM, Mongoengine ODM and custom python objects.
Papers that mentioned: 1

Very Likely Science (100)

pypi: foot

Fetches a list of URLs and silly walks through each site to gather information.
Papers that mentioned: 1

Likely Science (40)

pypi: Toolserver

Toolserver Framework for Python
Papers that mentioned: 1

Very Likely Science (65)

pypi: keras-rl

Deep Reinforcement Learning for Keras
Papers that mentioned: 1

Very Likely Science (100)

cran: upsetjs

'HTMLWidget' Wrapper of 'UpSet.js' for Exploring Large Set Intersections
Papers that mentioned: 1

Very Likely Science (75)

pypi: aiocoap

Python CoAP library
Papers that mentioned: 1

Very Likely Science (100)

pypi: editdistance

Fast implementation of the edit distance(Levenshtein distance)
Papers that mentioned: 1

Very Likely Science (75)

cran: RSocrata

Download or Upload 'Socrata' Data Sets
Papers that mentioned: 1

Very Likely Science (65)

pypi: kafka-python

Pure Python client for Apache Kafka
Papers that mentioned: 1

Very Likely Science (85)

pypi: aggregation

Papers that mentioned: 1

Very Likely Science (65)

pypi: jsonschema

An implementation of JSON Schema validation for Python
Papers that mentioned: 1

Very Likely Science (100)

pypi: functools

Fast tools for functional programming
Papers that mentioned: 1

Very Likely Science (65)